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Assembly Name: uagpf v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene67 uagpf v2.0 376
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene786 uagpf v2.0 1963
AutoFact: Pectase lyase n=2 Tax=Prunus persica RepID=D4NXR8_PRUPE 0.0
FL-Next: sp=Probable pectate lyase 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pectate lyase 0.0
Complete
uagpf_v2_unigene1361 uagpf v2.0 831
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
N-terminus
uagpf_v2_unigene2006 uagpf v2.0 543
AutoFact: pectate lyase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
N-terminus
uagpf_v2_unigene2392 uagpf v2.0 1483
AutoFact: polygalacturonase [Cucumis sativus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
uagpf_v2_unigene2632 uagpf v2.0 1530
AutoFact: Predicted protein n=11 Tax=Physcomitrella patens RepID=A9S6L2_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2712 uagpf v2.0 587
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
Blast2go: probable polygalacturonase-like 0.0
unknown
uagpf_v2_unigene3029 uagpf v2.0 471
AutoFact: Pectinesterase n=1 Tax=Vitis vinifera RepID=A5BYJ7_VITVI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene3211 uagpf v2.0 542
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectin methylesterase 0.0
C-terminus
uagpf_v2_unigene3595 uagpf v2.0 403
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 0.0
Blast2go: probable polygalacturonase-like 0.0
unknown
uagpf_v2_unigene4175 uagpf v2.0 249
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
Blast2go: probable pectinesterase 53-like 0.0
unknown
uagpf_v2_unigene4451 uagpf v2.0 1099
AutoFact: pectate lyase [Arabidopsis thaliana] gb|ACE95182.1| At3g55140 [Arabidopsis thaliana] gb|ACF04806.1| At3g55140 [Arabidopsis thaliana] gb|AEE79344.1| pectate lyase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectate lyase 4-like 0.0
N-terminus
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene5103 uagpf v2.0 959
AutoFact: putative pectinesterase 68 [Arabidopsis thaliana] sp|Q8LPF3.1|PME68_ARATH RecName: Full=Probable pectinesterase 68; Short=PE 68; AltName: Full=Pectin methylesterase 68; Short=AtPME68; Flags: Precursor gb|AAM26686.1| AT5g47500/MNJ7_9 [Arabidopsis thaliana] 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5342 uagpf v2.0 889
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Putative C-terminus
uagpf_v2_unigene6053 uagpf v2.0 605
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
C-terminus
uagpf_v2_unigene6072 uagpf v2.0 1218
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 4.0e-24
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase 53-like 3.2253e-27
C-terminus
uagpf_v2_unigene6522 uagpf v2.0 619
AutoFact: SNARE associated Golgi protein family [Arabidopsis thaliana] gb|AAR92258.1| At1g03260 [Arabidopsis thaliana] gb|AAS47670.1| At1g03260 [Arabidopsis thaliana] gb|AEE27551.1| SNARE associated Golgi protein family [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tvp38 tmem64 family membrane protein slr0305-like 0.0
C-terminus
uagpf_v2_unigene6765 uagpf v2.0 841
AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus
uagpf_v2_unigene7558 uagpf v2.0 492
AutoFact: RecName: Full=Pectate lyase; AltName: Full=ZePel; Flags: Precursor emb|CAA70735.1| pectate lyase [Zinnia violacea] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.35072e-31
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain