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Assembly Name: uagpf v2.0

Name: Pectin lyase fold

Term: IPR012334  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene7637 uagpf v2.0 467
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene8285 uagpf v2.0 865
AutoFact: Pectinesterase n=1 Tax=Taiwania cryptomerioides RepID=B0L3S3_9CONI 0.0
FL-Next: sp=Pectinesterase; Taiwania cryptomerioides. 0.0
Blast2go: pectinesterase 0.0
C-terminus
uagpf_v2_unigene8981 uagpf v2.0 449
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9SSX2_RICCO 5.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 3.72013e-15
Putative N-terminus
uagpf_v2_unigene9023 uagpf v2.0 996
AutoFact: SNARE associated Golgi family protein [Arabidopsis thaliana] gb|AAT70495.1| At5g19070 [Arabidopsis thaliana] gb|AAW70390.1| At5g19070 [Arabidopsis thaliana] dbj|BAF00807.1| hypothetical protein [Arabidopsis thaliana] gb|AED92648.1| SNARE associated Golgi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tvp38 tmem64 family membrane protein slr0305-like 0.0
C-terminus
uagpf_v2_unigene9402 uagpf v2.0 638
AutoFact: pectate lyase [Gossypium hirsutum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 0.0
C-terminus
uagpf_v2_unigene9496 uagpf v2.0 384
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Internal
uagpf_v2_unigene9881 uagpf v2.0 633
AutoFact: Polygalacturonase n=1 Tax=Cucumis melo RepID=O81245_CUCME 4.0e-08
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: endo-polygalacturonase 5.16914e-09
Putative C-terminus
uagpf_v2_unigene9941 uagpf v2.0 732
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
Putative N-terminus
uagpf_v2_unigene10076 uagpf v2.0 1385
AutoFact: peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana] gb|AAS47614.1| At1g53530 [Arabidopsis thaliana] gb|AAS76728.1| At1g53530 [Arabidopsis thaliana] dbj|BAF01030.1| hypothetical protein [Arabidopsis thaliana] gb|AEE32952.1| peptidase-S24/S26 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial inner membrane protease subunit 1 0.0
Complete
uagpf_v2_unigene10208 uagpf v2.0 1546
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Putative C-terminus
uagpf_v2_unigene11131 uagpf v2.0 1899
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Complete
uagpf_v2_unigene11682 uagpf v2.0 360
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 4.0e-35
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 6.42972e-41
Putative N-terminus
uagpf_v2_unigene11808 uagpf v2.0 1797
AutoFact: Reverse transcriptase n=1 Tax=Picea glauca RepID=Q9M5J7_PICGL 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: gag-pol polyprotein 0.0
C-terminus
uagpf_v2_unigene12086 uagpf v2.0 652
AutoFact: polygalacturonase 5 [Solanum lycopersicum] 3.0e-23
FL-Next: sp=Polygalacturonase; Juniperus ashei (Ozark white cedar). 0.0
Blast2go: polygalacturonase 1.21649e-26
Putative C-terminus
uagpf_v2_unigene12560 uagpf v2.0 783
AutoFact: Pectinesterase n=1 Tax=Ricinus communis RepID=B9RKG6_RICCO 0.0
Blast2go: probable pectinesterase 53-like 0.0
unknown
uagpf_v2_unigene12588 uagpf v2.0 539
AutoFact: protein kinase MSK-3-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: shaggy-related protein kinase epsilon 0.0
N-terminus
uagpf_v2_unigene13001 uagpf v2.0 1269
AutoFact: pectinesterase 11 [Arabidopsis thaliana] sp|Q9SIJ9.1|PME11_ARATH RecName: Full=Putative pectinesterase 11; Short=PE 11; AltName: Full=Pectin methylesterase 11; Short=AtPME11 gb|AAD23644.1| putative pectinesterase [Arabidopsis thaliana] gb|AEC07202.1| pect 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pectinesterase 11 0.0
Complete
uagpf_v2_unigene13469 uagpf v2.0 752
AutoFact: Pectinesterase n=2 Tax=Selaginella moellendorffii RepID=D8QSQ0_SELML 2.0e-32
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.92656e-38
N-terminus
uagpf_v2_unigene13483 uagpf v2.0 680
AutoFact: Pectinesterase n=1 Tax=Picea sitchensis RepID=A9NUI7_PICSI 0.0
FL-Next: sp=Pectinesterase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectinesterase pectinesterase inhibitor 51-like 0.0
C-terminus
uagpf_v2_unigene14392 uagpf v2.0 582
AutoFact: pectate lyase [Arabidopsis thaliana] gb|ACE95182.1| At3g55140 [Arabidopsis thaliana] gb|ACF04806.1| At3g55140 [Arabidopsis thaliana] gb|AEE79344.1| pectate lyase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable pectate lyase 4-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain