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Assembly Name: uagpf v2.0

Term: IPR019782  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene42343 uagpf v2.0 315
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-07
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene42471 uagpf v2.0 304
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SA71_RICCO 0.0
Blast2go: retinoblastoma-binding protein 5-like 0.0
Coding
uagpf_v2_unigene42506 uagpf v2.0 267
AutoFact: pfam09606, Med15, ARC105 or Med15 subunit of Mediator complex non-fungal 7.0e-05
Blast2go: transcriptional corepressor leunig 3.10352e-31
Putative coding
uagpf_v2_unigene42760 uagpf v2.0 142
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
unknown
uagpf_v2_unigene42772 uagpf v2.0 302
AutoFact: WD-40 repeat protein-like [Oryza sativa Japonica Group] gb|EAZ41606.1| hypothetical protein OsJ_26138 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: wd repeat-containing 0.0
Internal
uagpf_v2_unigene43040 uagpf v2.0 440
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAB51411.1| putative protein [Arabidopsis thaliana] emb|CAB81228.1| putative protein [Arabidopsis thaliana] gb|AEE82991.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana 1.0e-15
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transducin family protein 1.79709e-23
Internal
uagpf_v2_unigene43055 uagpf v2.0 264
AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
N-terminus
uagpf_v2_unigene43631 uagpf v2.0 426
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: periodic tryptophan protein 2 0.0
Internal
uagpf_v2_unigene44057 uagpf v2.0 383
AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb02g011180; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: wd-repeat membrane protein 0.0
Internal
uagpf_v2_unigene44264 uagpf v2.0 282
AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
FL-Next: tr=Phospholipase A-2-activating protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: phospholipase a-2-activating protein 0.0
N-terminus
uagpf_v2_unigene44352 uagpf v2.0 413
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RAI4_RICCO 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd repeat-containing protein 1.03411e-12
Putative N-terminus
uagpf_v2_unigene44448 uagpf v2.0 273
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene44617 uagpf v2.0 279
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
uagpf_v2_unigene44629 uagpf v2.0 246
AutoFact: protein FIZZY-related 1 [Arabidopsis thaliana] sp|Q8VZS9.1|FZR1_ARATH RecName: Full=Protein FIZZY-RELATED 1; AltName: Full=Cell cycle switch protein CCS52A2 gb|AAL36231.1| putative Srw1 protein [Arabidopsis thaliana] gb|AAM14174.1| putative Srw1 protein [ 3.0e-12
Blast2go: protein 2.12006e-20
unknown
uagpf_v2_unigene44658 uagpf v2.0 342
AutoFact: RecName: Full=Vacuolar protein sorting-associated protein 41 homolog gb|AAB60857.1| VPS41 [Solanum lycopersicum] 0.0
FL-Next: sp=Vacuolar protein sorting-associated protein 41 homolog; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: vacuolar protein sorting-associated protein 41 homolog 0.0
Internal
uagpf_v2_unigene44931 uagpf v2.0 323
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: wd-40 repeat protein 0.0
Internal
uagpf_v2_unigene45002 uagpf v2.0 350
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoporin seh1-like 0.0
Putative N-terminus
uagpf_v2_unigene45061 uagpf v2.0 453
AutoFact: NACHT and WD repeat domain-containing protein 1-like 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
uagpf_v2_unigene45070 uagpf v2.0 345
AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: phospholipase a-2-activating protein 0.0
C-terminus
uagpf_v2_unigene45181 uagpf v2.0 443
AutoFact: WS0348.C21_I08 WS-SE-N-A-19 Picea glauca cDNA clone WS0348_I08 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain