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Assembly Name: uagpf v2.0

Term: IPR019782  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene40372 uagpf v2.0 332
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
Blast2go: transcriptional corepressor leunig 0.0
unknown
uagpf_v2_unigene40398 uagpf v2.0 347
AutoFact: transducin/WD-40 repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene40416 uagpf v2.0 235
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleoporin seh1-like 0.0
Internal
uagpf_v2_unigene40456 uagpf v2.0 460
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Coding
uagpf_v2_unigene40458 uagpf v2.0 310
AutoFact: putative beige protein [Oryza sativa Japonica Group] 1.0e-09
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: beach domain-containing protein lvsa-like 7.30711e-13
N-terminus
uagpf_v2_unigene40558 uagpf v2.0 323
AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-45
Putative C-terminus
uagpf_v2_unigene40562 uagpf v2.0 334
AutoFact: A_TM018A10.24 gene product [Arabidopsis thaliana] emb|CAB80888.1| AT4g00790 [Arabidopsis thaliana] 8.0e-38
FL-Next: tr=Os02g0124700 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
uagpf_v2_unigene40570 uagpf v2.0 322
AutoFact: PPR domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene40642 uagpf v2.0 304
AutoFact: putative transducin / WD-40 repeat protein [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Ribosome biogenesis protein BOP1 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii). 0.0
Blast2go: ribosome biogenesis protein bop1 homolog 0.0
Internal
uagpf_v2_unigene40758 uagpf v2.0 346
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 6.0e-21
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 4.03913e-21
N-terminus
uagpf_v2_unigene40824 uagpf v2.0 252
AutoFact: Unassigned protein
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u3 small nucleolar rna-associated protein 18 homolog 0.0
Internal
uagpf_v2_unigene40976 uagpf v2.0 340
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
Blast2go: wd-40 repeat protein 0.0
unknown
uagpf_v2_unigene41147 uagpf v2.0 417
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
N-terminus
uagpf_v2_unigene41184 uagpf v2.0 275
AutoFact: Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis thaliana] gb|AAG12531.1|AC015446_12 Similar to Allinase [Arabidopsis thaliana] gb|AEE31667.1| Pyridoxal phosphate-dependent transferase domain-containing protein [Arabidopsis 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: tryptophan aminotransferase-related protein 4-like 0.0
Internal
uagpf_v2_unigene41286 uagpf v2.0 199
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
Internal
uagpf_v2_unigene41590 uagpf v2.0 287
AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
uagpf_v2_unigene41741 uagpf v2.0 420
AutoFact: root initiation defective 3 protein [Arabidopsis thaliana] emb|CAB66397.1| putative protein [Arabidopsis thaliana] gb|AAO42870.1| At3g49180 [Arabidopsis thaliana] dbj|BAE99952.1| hypothetical protein [Arabidopsis thaliana] gb|AEE78508.1| root initiation d 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat-containing protein 18-like 0.0
Putative N-terminus
uagpf_v2_unigene41808 uagpf v2.0 199
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
unknown
uagpf_v2_unigene42025 uagpf v2.0 411
AutoFact: Charged multivesicular body protein 4b, putative n=4 Tax=rosids RepID=B9RKD5_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene42251 uagpf v2.0 458
AutoFact: similar to beta-transducins (Pfam: PF00400, Score=71.7, E=1.5e-17, N=6) [Arabidopsis thaliana] emb|CAB81036.1| putative WD-repeat membrane protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: wd-repeat membrane protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain