Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene7883 uagpf v2.0 496
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
uagpf_v2_unigene7932 uagpf v2.0 382
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene8005 uagpf v2.0 1031
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8014 uagpf v2.0 471
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTB5_RICCO 5.0e-18
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: nucleotide binding 3.40779e-20
N-terminus
uagpf_v2_unigene8092 uagpf v2.0 796
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 66 kda stress protein 0.0
N-terminus
uagpf_v2_unigene8107 uagpf v2.0 374
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Putative coding
uagpf_v2_unigene8168 uagpf v2.0 435
AutoFact: phosphorylase family protein [Arabidopsis thaliana] dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] gb|AEE84891.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphorylase family protein 0.0
C-terminus
uagpf_v2_unigene8171 uagpf v2.0 623
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8243 uagpf v2.0 547
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Internal
uagpf_v2_unigene8294 uagpf v2.0 418
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
Blast2go: wd repeat-containing protein 70-like 0.0
Putative coding
uagpf_v2_unigene8308 uagpf v2.0 984
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9S6L1_RICCO 0.0
FL-Next: sp=F-box/WD-40 repeat-containing protein At5g21040; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at5g21040-like protein 0.0
C-terminus
uagpf_v2_unigene8317 uagpf v2.0 324
AutoFact: Unassigned protein
Blast2go: vascular protein 0.0
Coding
uagpf_v2_unigene8336 uagpf v2.0 683
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8390 uagpf v2.0 861
AutoFact: WD-40 repeat protein [Solanum lycopersicum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 repeat-containing protein smu1 0.0
N-terminus
uagpf_v2_unigene8471 uagpf v2.0 419
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
uagpf_v2_unigene8489 uagpf v2.0 552
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001190666.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAM20586.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AAN15676.1| putative WD-repeat protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8493 uagpf v2.0 1922
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os08g0108200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene8523 uagpf v2.0 1017
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Complete
uagpf_v2_unigene8640 uagpf v2.0 754
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE79079.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene8719 uagpf v2.0 319
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain