Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6358 uagpf v2.0 1777
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative C-terminus
uagpf_v2_unigene6433 uagpf v2.0 568
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9S7C0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene6453 uagpf v2.0 544
AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 0.0
C-terminus
uagpf_v2_unigene6600 uagpf v2.0 691
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana] gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana] gb|AEE76041.1| 0.0
Blast2go: 66 kda stress protein 0.0
unknown
uagpf_v2_unigene6837 uagpf v2.0 601
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T5V8_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene6884 uagpf v2.0 1257
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein transport protein sec31 0.0
Internal
uagpf_v2_unigene6929 uagpf v2.0 725
AutoFact: transducin-like protein [Arabidopsis thaliana] gb|AAK43883.1|AF370506_1 putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAD10153.1| putative WD-40 repeat protein [Arabidopsis thaliana] gb|AAM91214.1| putative WD-40 repeat protein [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutamate-rich wd repeat-containing protein 1 0.0
N-terminus
uagpf_v2_unigene6990 uagpf v2.0 593
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T7M5_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd repeat-containing protein 44-like 0.0
C-terminus
uagpf_v2_unigene7263 uagpf v2.0 636
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb07g028660; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: elongator protein 2 0.0
C-terminus
uagpf_v2_unigene7357 uagpf v2.0 760
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02026.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65008.1| WD-repeat protein, putative [Arabidopsis thaliana] gb|AAN86145.1| putative WD-repeat protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein lst8 homolog 0.0
C-terminus
uagpf_v2_unigene7383 uagpf v2.0 668
AutoFact: Aladin-related / adracalin-related protein n=3 Tax=Arabidopsis RepID=Q8GWR1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: aladin-related adracalin-related protein 0.0
C-terminus
uagpf_v2_unigene7409 uagpf v2.0 882
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative N-terminus
uagpf_v2_unigene7444 uagpf v2.0 679
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
N-terminus
uagpf_v2_unigene7536 uagpf v2.0 428
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK50091.1|AF372951_1 At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AAN72242.1| At1g78070/F28K19_28 [Arabidopsis thaliana] gb|AEE36064.1| transducin/WD-40 repeat-containing protein [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene7583 uagpf v2.0 475
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
uagpf_v2_unigene7600 uagpf v2.0 421
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Internal
uagpf_v2_unigene7639 uagpf v2.0 432
AutoFact: enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] gb|AEE75331.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana] 0.0
Blast2go: enhancer of mrna-decapping protein 4 0.0
unknown
uagpf_v2_unigene7730 uagpf v2.0 411
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin family protein 0.0
Internal
uagpf_v2_unigene7817 uagpf v2.0 446
AutoFact: PREDICTED: WD repeat-containing protein 18-like [Monodelphis domestica] 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 5.98843e-26
Putative N-terminus
uagpf_v2_unigene7862 uagpf v2.0 1462
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 0.0
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein transport protein sec31 0.0
Putative C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain