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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene48808 uagpf v2.0 328
AutoFact: glycine-rich protein 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 1.00145e-24
Internal
uagpf_v2_unigene48822 uagpf v2.0 332
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Putative C-terminus
uagpf_v2_unigene48929 uagpf v2.0 273
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1J5_RICCO 0.0
Blast2go: nucleotide binding 0.0
Putative coding
uagpf_v2_unigene49102 uagpf v2.0 222
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK92820.1| unknown protein [Arabidopsis thaliana] gb|AAL08286.1| AT4g18900/F13C5_70 [Arabidopsis thaliana] gb|AAM44990.1| unknown protein [Arabidopsis thaliana] gb|AEE84104.1| transducin 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
N-terminus
uagpf_v2_unigene49274 uagpf v2.0 270
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RZN7_RICCO 7.0e-12
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: bromodomain and wd repeat domain-containing protein 6.97289e-14
Internal
uagpf_v2_unigene49277 uagpf v2.0 248
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RPC6_RICCO 1.0e-13
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: leunig 3.25626e-16
Putative C-terminus
uagpf_v2_unigene49365 uagpf v2.0 322
AutoFact: WD and tetratricopeptide repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RJU3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: wd and tetratricopeptide repeats protein 1-like 0.0
Internal
uagpf_v2_unigene49635 uagpf v2.0 448
AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alliin lyase 0.0
C-terminus
uagpf_v2_unigene49766 uagpf v2.0 482
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 9.0e-14
Blast2go: transducin family protein 1.89164e-16
unknown
uagpf_v2_unigene49796 uagpf v2.0 677
AutoFact: F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] sp|Q9SV01.2|FBW4_ARATH RecName: Full=F-box/WD-40 repeat-containing protein At3g52030 gb|AEE78876.1| F-box/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box wd-40 repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene49912 uagpf v2.0 540
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
N-terminus
uagpf_v2_unigene49976 uagpf v2.0 470
AutoFact: prolactin regulatory element-binding protein [Arabidopsis thaliana] sp|Q39221.4|STLP2_ARATH RecName: Full=SEC12-like protein 2 gb|AAC67323.1| putative protein transport protein SEC12p [Arabidopsis thaliana] gb|AAL67028.1| putative protein transport protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene50004 uagpf v2.0 425
AutoFact: WD repeat-containing protein 5 [Danio rerio] gb|AAH52124.1| Wdr5 protein [Danio rerio] gb|AAH66729.1| Wdr5 protein [Danio rerio] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
C-terminus
uagpf_v2_unigene50052 uagpf v2.0 303
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S411_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd40 repeat compass complex protein 0.0
Internal
uagpf_v2_unigene50063 uagpf v2.0 454
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene50185 uagpf v2.0 344
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
Blast2go: cellulose synthase 0.0
unknown
uagpf_v2_unigene50186 uagpf v2.0 379
AutoFact: Guanine nucleotide-binding protein subunit beta-1 n=9 Tax=core eudicotyledons RepID=GBB1_TOBAC 0.0
Blast2go: g protein beta subunit 0.0
Putative coding
uagpf_v2_unigene50508 uagpf v2.0 309
AutoFact: Transducin/WD-40 repeat-containing protein n=1 Tax=Arabidopsis thaliana RepID=Q680F0_ARATH 1.0e-10
unknown
uagpf_v2_unigene50530 uagpf v2.0 380
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal
uagpf_v2_unigene50591 uagpf v2.0 437
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain