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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46934 uagpf v2.0 222
AutoFact: WD-repeat protein, putative 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene47003 uagpf v2.0 441
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 8.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 63 7.22396e-30
C-terminus
uagpf_v2_unigene47078 uagpf v2.0 268
AutoFact: WD40 repeat protein [Ipomoea purpurea] dbj|BAE94399.1| WD40 repeat protein [Ipomoea nil] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47119 uagpf v2.0 413
AutoFact: Unassigned protein
Blast2go: protein 6.39085e-18
unknown
uagpf_v2_unigene47221 uagpf v2.0 268
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|ABH04482.1| At2g16405 [Arabidopsis thaliana] gb|AEC06494.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 13-like 0.0
Putative N-terminus
uagpf_v2_unigene47408 uagpf v2.0 386
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
uagpf_v2_unigene47492 uagpf v2.0 438
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 0.0
Internal
uagpf_v2_unigene47664 uagpf v2.0 262
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK76712.1| unknown protein [Arabidopsis thaliana] gb|AAM45004.1| unknown protein [Arabidopsis thaliana] gb|AED97944.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=WD-repeat protein; Carica papaya (Papaya). 0.0
Blast2go: wd repeat domain-containing protein 83-like 0.0
N-terminus
uagpf_v2_unigene47782 uagpf v2.0 422
AutoFact: [R] COG2319 FOG: WD40 repeat 3.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bromodomain and wd repeat-containing protein 0.0
Internal
uagpf_v2_unigene47788 uagpf v2.0 341
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=JHL25H03.15 protein; Jatropha curcas. 0.0
Blast2go: periodic tryptophan protein 2-like 0.0
Internal
uagpf_v2_unigene47862 uagpf v2.0 336
AutoFact: putative transducin / WD-40 repeat protein [Oryza sativa Japonica Group] 0.0
Blast2go: ribosome biogenesis protein bop1 homolog 0.0
Coding
uagpf_v2_unigene47890 uagpf v2.0 192
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE78537.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
unknown
uagpf_v2_unigene47893 uagpf v2.0 250
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-19
Blast2go: beach domain-containing protein lvsa-like 0.0
unknown
uagpf_v2_unigene47949 uagpf v2.0 169
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
uagpf_v2_unigene48367 uagpf v2.0 258
AutoFact: Bromodomain and WD repeat domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNP7_PHYPA 0.0
FL-Next: tr=Bromodomain and WD repeat domain-containing protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: wd40 yvtn repeat and bromo-wdr9-i-like domain-containing protein 0.0
Internal
uagpf_v2_unigene48442 uagpf v2.0 223
AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 0.0
FL-Next: tr=BWF1-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Internal
uagpf_v2_unigene48504 uagpf v2.0 295
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: periodic tryptophan protein 2 0.0
Internal
uagpf_v2_unigene48656 uagpf v2.0 421
AutoFact: cellulose synthase 5 [Physcomitrella patens] 2.0e-40
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene48735 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene48739 uagpf v2.0 336
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain