Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene38853 uagpf v2.0 563
• AutoFact: anaphase promoting complex subunit 4 [Arabidopsis thaliana] 7.00649e-45
• FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: anaphase-promoting complex subunit 4 0.0
Internal
uagpf_v2_unigene38906 uagpf v2.0 536
• AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phospholipase a-2-activating protein 0.0
Internal
uagpf_v2_unigene38989 uagpf v2.0 475
• AutoFact: Unassigned protein
unknown
uagpf_v2_unigene39304 uagpf v2.0 462
• AutoFact: NLE multi-domain protein 3.0e-12
• FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: notchless protein homolog 0.0
N-terminus
uagpf_v2_unigene39339 uagpf v2.0 498
• AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 8.0e-16
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein topless 3.20395e-16
Internal
uagpf_v2_unigene39380 uagpf v2.0 324
• AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Internal
uagpf_v2_unigene39583 uagpf v2.0 495
• AutoFact: Metallothio multi-domain protein 1.0e-08
• Blast2go: transducin wd40 domain-containing protein 0.0
unknown
uagpf_v2_unigene39663 uagpf v2.0 240
• AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-26
• FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
• Blast2go: ramosa 1 enhancer locus 2 1.38002e-28
Internal
uagpf_v2_unigene39871 uagpf v2.0 377
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001189878.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana] gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis t 6.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.71308e-34
N-terminus
uagpf_v2_unigene39923 uagpf v2.0 370
• AutoFact: Cellulose synthase-like protein n=2 Tax=Populus RepID=B9IPJ4_POPTR 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Blast2go: cellulose synthase-like protein 0.0
Internal
uagpf_v2_unigene40204 uagpf v2.0 304
• AutoFact: Pre-mRNA splicing factor n=1 Tax=Cucumis melo subsp. melo RepID=E5GBJ7_CUCME 0.0
• Blast2go: pre-mrna-processing factor 17-like 0.0
unknown
uagpf_v2_unigene40342 uagpf v2.0 362
• AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 4.0e-10
• FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: protein hira 8.02265e-14
C-terminus
uagpf_v2_unigene40372 uagpf v2.0 332
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RWJ4_RICCO 0.0
• Blast2go: transcriptional corepressor leunig 0.0
unknown
uagpf_v2_unigene40398 uagpf v2.0 347
• AutoFact: transducin/WD-40 repeat protein [Oryza sativa Japonica Group] 0.0
• FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene40416 uagpf v2.0 235
• AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: nucleoporin seh1-like 0.0
Internal
uagpf_v2_unigene40456 uagpf v2.0 460
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
• Blast2go: ddb1- and cul4-associated factor 8-like 0.0
Coding
uagpf_v2_unigene40458 uagpf v2.0 310
• AutoFact: putative beige protein [Oryza sativa Japonica Group] 1.0e-09
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: beach domain-containing protein lvsa-like 7.30711e-13
N-terminus
uagpf_v2_unigene40558 uagpf v2.0 323
• AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
uagpf_v2_unigene40562 uagpf v2.0 334
• AutoFact: A_TM018A10.24 gene product [Arabidopsis thaliana] emb|CAB80888.1| AT4g00790 [Arabidopsis thaliana] 8.0e-38
• FL-Next: tr=Os02g0124700 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: vacuolar protein sorting-associated protein 8 homolog 0.0
Internal
uagpf_v2_unigene40570 uagpf v2.0 322
• AutoFact: PPR domain containing protein 2.0e-05
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain