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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37043 uagpf v2.0 468
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL09795.1| At1g27840/F28L5_15 [Arabidopsis thaliana] gb|AAL66962.1| unknown protein [Arabidopsis thaliana] gb|AAM20274.1| unknown protein [Arabidopsis thaliana] gb|AEE30881.1| transduci 4.0e-35
FL-Next: tr=Putative uncharacterized protein F28L5.15; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transducin wd-40 repeat-containing protein 1.88194e-42
Putative N-terminus
uagpf_v2_unigene37060 uagpf v2.0 476
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] emb|CAB62469.1| kinesin-like protein [Arabidopsis thaliana] gb|AEE78572.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Chromosome-associated kinesin KIF4A, putative; Ricinus communis (Castor bean). 0.0
Blast2go: chromosome-associated kinesin 0.0
Internal
uagpf_v2_unigene37327 uagpf v2.0 567
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9SAP3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene37428 uagpf v2.0 461
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
uagpf_v2_unigene37460 uagpf v2.0 455
AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
C-terminus
uagpf_v2_unigene37518 uagpf v2.0 437
AutoFact: DNA damage-binding protein 2 [Arabidopsis thaliana] sp|Q6NQ88.1|DDB2_ARATH RecName: Full=Protein DAMAGED DNA-BINDING 2; AltName: Full=UV-damaged DNA-binding protein 2 gb|AAQ65193.1| At5g58760 [Arabidopsis thaliana] dbj|BAD42887.1| putative protein [Arabid 0.0
FL-Next: sp=Protein DAMAGED DNA-BINDING 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein damaged dna-binding 2 0.0
N-terminus
uagpf_v2_unigene37778 uagpf v2.0 519
AutoFact: Ataxia telangiectasia mutated, putative n=1 Tax=Ricinus communis RepID=B9RB21_RICCO 0.0
FL-Next: sp=Serine/threonine-protein kinase ATM; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: serine-protein kinase atm 0.0
C-terminus
uagpf_v2_unigene37953 uagpf v2.0 572
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.63889e-19
N-terminus
uagpf_v2_unigene37968 uagpf v2.0 501
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAC27402.2| expressed protein [Arabidopsis thaliana] gb|AAM65204.1| unknown [Arabidopsis thaliana] dbj|BAC42145.1| unknown protein [Arabidopsis thaliana] gb|AAO63858.1| putative G-protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 55-like 0.0
N-terminus
uagpf_v2_unigene37979 uagpf v2.0 635
AutoFact: protein FIZZY-related 3 [Arabidopsis thaliana] ref|NP_001190305.1| protein FIZZY-related 3 [Arabidopsis thaliana] sp|Q8LPL5.1|FZR3_ARATH RecName: Full=Protein FIZZY-RELATED 3; AltName: Full=Cell cycle switch protein CCS52B gb|AAM20433.1| cell cycle switch 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38177 uagpf v2.0 412
AutoFact: elongator protein 2 [Arabidopsis thaliana] gb|AEE32440.1| elongator protein 2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Os08g0493900 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: elongator protein 2 0.0
Internal
uagpf_v2_unigene38213 uagpf v2.0 523
AutoFact: MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|AAL33648.1|AF440219_1 MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|ACN33308.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
uagpf_v2_unigene38263 uagpf v2.0 369
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
Blast2go: angio-associated migratory cell 0.0
unknown
uagpf_v2_unigene38268 uagpf v2.0 410
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: sp=WD-40 repeat-containing protein MSI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
uagpf_v2_unigene38530 uagpf v2.0 263
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38583 uagpf v2.0 443
AutoFact: putative beige protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beach domain-containing protein lvsa-like 0.0
Internal
uagpf_v2_unigene38722 uagpf v2.0 485
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38733 uagpf v2.0 354
AutoFact: THO complex subunit 3 [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] gb|AED96724.1| THO complex subunit 3 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene38761 uagpf v2.0 417
AutoFact: pfam02138, Beach, Beige/BEACH domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 and beach domain-containing protein 0.0
Internal
uagpf_v2_unigene38768 uagpf v2.0 330
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain