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Assembly Name: uagpf v2.0

Name: WD40-repeat-containing domain

Term: IPR017986  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene33340 uagpf v2.0 354
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beach domain-containing protein lvsa-like 0.0
Internal
uagpf_v2_unigene33415 uagpf v2.0 200
AutoFact: [R] COG2319 FOG: WD40 repeat 5.0e-19
Blast2go: beach domain-containing protein lvsa-like 0.0
unknown
uagpf_v2_unigene33436 uagpf v2.0 394
AutoFact: F-box and wd40 domain protein, putative n=1 Tax=Ricinus communis RepID=B9RE28_RICCO 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: stomatal cytokinesis defective scd1 protein 5.60519e-45
Internal
uagpf_v2_unigene33578 uagpf v2.0 632
AutoFact: LisH domain containing protein 4.0e-05
FL-Next: sp=DDB1- and CUL4-associated factor homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ddb1- and cul4-associated factor homolog 1-like 0.0
Internal
uagpf_v2_unigene33741 uagpf v2.0 255
AutoFact: zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] dbj|BAB11046.1| unnamed protein product [Arabidopsis thaliana] gb|AED96154.1| zinc finger CCCH domain-containing protein 63 [Arabidopsis thaliana] 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 63; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
C-terminus
uagpf_v2_unigene33769 uagpf v2.0 270
AutoFact: Periodic tryptophan protein-associated region; WD40-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: periodic tryptophan protein 2 0.0
Internal
uagpf_v2_unigene33898 uagpf v2.0 416
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein phosphatase bsl2-like 0.0
Internal
uagpf_v2_unigene34025 uagpf v2.0 378
AutoFact: protein HIRA [Zea mays] sp|Q32SG6.1|HIRA_MAIZE RecName: Full=Protein HIRA; AltName: Full=Histone regulator protein gb|AAY24681.1| HIRA [Zea mays] 1.0e-08
FL-Next: sp=Protein HIRA; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: histone transcription regulator hira 5.78727e-11
N-terminus
uagpf_v2_unigene34113 uagpf v2.0 307
AutoFact: Putative mitotic checkpoint protein, 5'-partial (Fragment) n=1 Tax=Oryza sativa Japonica Group RepID=Q84T57_ORYSJ 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein 6.01017e-42
C-terminus
uagpf_v2_unigene34393 uagpf v2.0 357
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK50098.1|AF372960_1 AT3g15470/MJK13_13 [Arabidopsis thaliana] gb|AAF35413.1| unknown protein [Arabidopsis thaliana] dbj|BAB02376.1| WD-40 repeat protein-like [Arabidopsis thaliana] gb|A 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: wd repeat-containing protein 44-like 0.0
Internal
uagpf_v2_unigene34395 uagpf v2.0 162
AutoFact: LisH domain containing protein 9.0e-06
Blast2go: uncharacterized protein loc100501624 7.01384e-10
unknown
uagpf_v2_unigene34574 uagpf v2.0 196
AutoFact: NACHT and WD repeat domain-containing protein 1-like 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
uagpf_v2_unigene34812 uagpf v2.0 578
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=5 Tax=Magnoliophyta RepID=D7T1Q5_VITVI 0.0
FL-Next: Isoform 2 of Serine/threonine-protein phosphatase BSL3 OS=Arabidopsis thaliana GN=BSL3 0.0
Blast2go: serine threonine-protein phosphatase bsl2-like 0.0
Internal
uagpf_v2_unigene34820 uagpf v2.0 334
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: vascular protein 0.0
Internal
uagpf_v2_unigene34997 uagpf v2.0 367
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
Putative coding
uagpf_v2_unigene35084 uagpf v2.0 298
AutoFact: actin-related protein C1B [Arabidopsis thaliana] gb|AAL27513.1|AF439845_1 At2g31300/F16D14.14 [Arabidopsis thaliana] gb|AAD20675.1| putative ARP2/3 protein complex subunit p41 [Arabidopsis thaliana] gb|AAN18136.1| At2g31300/F16D14.14 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein c1a 0.0
N-terminus
uagpf_v2_unigene35143 uagpf v2.0 263
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 3-like 0.0
N-terminus
uagpf_v2_unigene35525 uagpf v2.0 170
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE79079.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
Internal
uagpf_v2_unigene35580 uagpf v2.0 405
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.80898e-26
Internal
uagpf_v2_unigene35588 uagpf v2.0 124
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain