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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene39735 uagpf v2.0 400
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
N-terminus
uagpf_v2_unigene39838 uagpf v2.0 389
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene39923 uagpf v2.0 370
• AutoFact: Cellulose synthase-like protein n=2 Tax=Populus RepID=B9IPJ4_POPTR 0.0
• FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
• Blast2go: cellulose synthase-like protein 0.0
Internal
uagpf_v2_unigene39990 uagpf v2.0 293
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T6X0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl13 0.0
Internal
uagpf_v2_unigene40042 uagpf v2.0 542
• AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
uagpf_v2_unigene40157 uagpf v2.0 421
• AutoFact: putative E3 ubiquitin-protein ligase ARI1 [Arabidopsis thaliana] sp|Q949V6.1|ARI1_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI1; AltName: Full=ARIADNE-like protein ARI1; AltName: Full=Protein ariadne homolog 1 gb|AAK92801.1| unknown protei 1.0e-35
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase ari1 1.35926e-43
Internal
uagpf_v2_unigene40172 uagpf v2.0 446
• AutoFact: Copine III-like protein (Fragment) n=1 Tax=Picea abies RepID=B2KZF7_PICAB 2.8026e-45
• Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
unknown
uagpf_v2_unigene40558 uagpf v2.0 323
• AutoFact: COP1 homolog [Solanum lycopersicum] 5.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.4013e-45
Putative C-terminus
uagpf_v2_unigene40600 uagpf v2.0 293
• AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Coding
uagpf_v2_unigene40679 uagpf v2.0 431
• AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: cleavage and polyadenylation specificity 0.0
Internal
uagpf_v2_unigene40957 uagpf v2.0 388
• AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
Putative coding
uagpf_v2_unigene41124 uagpf v2.0 341
• AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
Internal
uagpf_v2_unigene41375 uagpf v2.0 345
• AutoFact: RING-H2 finger protein ATL58 [Arabidopsis thaliana] sp|Q570X5.1|ATL58_ARATH RecName: Full=RING-H2 finger protein ATL58 dbj|BAD94869.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31599.1| RING-H2 finger protein ATL58 [Arabidopsis thaliana] 7.0e-34
• FL-Next: tr=Putative uncharacterized protein Sb04g022820; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: ring-h2 finger protein atl7-like 0.0
N-terminus
uagpf_v2_unigene41432 uagpf v2.0 517
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
Internal
uagpf_v2_unigene41507 uagpf v2.0 342
• AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene41590 uagpf v2.0 287
• AutoFact: Os09g0327200 protein n=4 Tax=Oryza sativa RepID=Q0J2K9_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g02750-like 0.0
Internal
uagpf_v2_unigene41724 uagpf v2.0 376
• AutoFact: IBR domain containing protein [Arabidopsis thaliana] emb|CAB75476.1| putative protein [Arabidopsis thaliana] gb|AEE78034.1| IBR domain containing protein [Arabidopsis thaliana] 1.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene42346 uagpf v2.0 326
• AutoFact: YDG_SRA multi-domain protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene42542 uagpf v2.0 255
• AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
Internal
uagpf_v2_unigene42735 uagpf v2.0 254
• AutoFact: F8M12.8 protein n=1 Tax=Arabidopsis thaliana RepID=O81621_ARATH 1.0e-11
• FL-Next: tr=F8M12.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: phd finger family protein 4.17811e-15
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain