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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene36646 uagpf v2.0 440
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene36823 uagpf v2.0 604
• AutoFact: 2x PHD domain containing protein [Cryptosporidium parvum Iowa II] gb|EAK87407.1| 2x PHD domain containing protein [Cryptosporidium parvum Iowa II] 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene36869 uagpf v2.0 477
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
unknown
uagpf_v2_unigene36902 uagpf v2.0 494
• AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
• Blast2go: protein ariadne- 0.0
unknown
uagpf_v2_unigene36992 uagpf v2.0 394
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
C-terminus
uagpf_v2_unigene37013 uagpf v2.0 429
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peroxisome biogenesis factor 10-like 0.0
N-terminus
uagpf_v2_unigene37019 uagpf v2.0 462
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
N-terminus
uagpf_v2_unigene37165 uagpf v2.0 406
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene37202 uagpf v2.0 448
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent helicase brm-like 0.0
Internal
uagpf_v2_unigene37245 uagpf v2.0 404
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 7.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene37255 uagpf v2.0 588
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 8.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl3c 0.0
C-terminus
uagpf_v2_unigene37444 uagpf v2.0 403
• AutoFact: DUF221 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene37547 uagpf v2.0 688
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene37729 uagpf v2.0 582
• AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein ariadne- 0.0
Putative C-terminus
uagpf_v2_unigene38288 uagpf v2.0 396
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 0.0
Internal
uagpf_v2_unigene38321 uagpf v2.0 429
• AutoFact: Ubiquitin-protein ligase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC73_CUCME 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger (c3hc4-type ring finger) protein family-like 0.0
Internal
uagpf_v2_unigene38336 uagpf v2.0 487
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAC42417.1| unknown protein [Arabidopsis thaliana] gb|AAP68217.1| At3g05250 [Arabidopsis thaliana] gb|AAZ14063.1| At3g05250 [Arabidopsis thaliana] gb|AEE74211.1| RING/U-box domain-containing 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein binding 3.7602e-37
Putative N-terminus
uagpf_v2_unigene38936 uagpf v2.0 268
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene38965 uagpf v2.0 371
• AutoFact: Os08g0451800 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q0J5A1_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase rnf144a-like 0.0
N-terminus
uagpf_v2_unigene39373 uagpf v2.0 440
• AutoFact: pfam00628, PHD, PHD-finger 2.0e-06
• FL-Next: sp=Histone acetyltransferase HAC4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein at4g10930-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain