Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene33883 uagpf v2.0 409
AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AEE77301.1| C3H4 type zinc finger protein [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 1.50712e-35
Putative C-terminus
uagpf_v2_unigene34091 uagpf v2.0 410
AutoFact: DUF1262 domain containing protein 2.0e-18
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 8.19569e-35
Internal
uagpf_v2_unigene34364 uagpf v2.0 111
AutoFact: RING-H2 finger protein ATL13 [Arabidopsis thaliana] sp|Q940Q4.2|ATL13_ARATH RecName: Full=RING-H2 finger protein ATL13 gb|AEE85760.1| RING-H2 finger protein ATL13 [Arabidopsis thaliana] 1.0e-37
Blast2go: protein 0.0
unknown
uagpf_v2_unigene34508 uagpf v2.0 214
AutoFact: WS01041.B21.1_D16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01041_D16 3, mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase bah1-like 2.53227e-31
C-terminus
uagpf_v2_unigene34849 uagpf v2.0 343
AutoFact: YDG_SRA multi-domain protein 0.0
Blast2go: zinc finger 0.0
unknown
uagpf_v2_unigene35310 uagpf v2.0 181
AutoFact: Cellulose synthase-like D3, glycosyltransferase family 2 protein n=4 Tax=Physcomitrella patens RepID=A9SS17_PHYPA 0.0
Blast2go: cellulose synthase-like glycosyltransferase family 2 protein 0.0
unknown
uagpf_v2_unigene35547 uagpf v2.0 259
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RJR5_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 9.51201e-39
Internal
uagpf_v2_unigene35792 uagpf v2.0 294
AutoFact: Cellulose synthase-like protein D4 n=2 Tax=Arabidopsis RepID=CSLD4_ARATH 0.0
FL-Next: sp=Cellulose synthase-like protein D4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cellulose synthase-like protein d3-like 0.0
Internal
uagpf_v2_unigene35800 uagpf v2.0 92
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene35920 uagpf v2.0 160
AutoFact: RING-H2 finger protein ATL58 [Arabidopsis thaliana] sp|Q570X5.1|ATL58_ARATH RecName: Full=RING-H2 finger protein ATL58 dbj|BAD94869.1| hypothetical protein [Arabidopsis thaliana] gb|AEE31599.1| RING-H2 finger protein ATL58 [Arabidopsis thaliana] 7.0e-34
Blast2go: ring-h2 finger protein atl7-like 0.0
unknown
uagpf_v2_unigene36077 uagpf v2.0 625
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
N-terminus
uagpf_v2_unigene36095 uagpf v2.0 590
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Putative N-terminus
uagpf_v2_unigene36161 uagpf v2.0 545
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene36229 uagpf v2.0 509
AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene36231 uagpf v2.0 648
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
uagpf_v2_unigene36281 uagpf v2.0 584
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
Blast2go: cleavage and polyadenylation specificity 0.0
unknown
uagpf_v2_unigene36350 uagpf v2.0 492
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974453.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974454.1| RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001190122.1| RING/U-box domain-con 2.0e-29
Blast2go: zinc c3hc4 type family protein 0.0
Coding
uagpf_v2_unigene36420 uagpf v2.0 429
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
uagpf_v2_unigene36498 uagpf v2.0 454
AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-32
Blast2go: zinc c3hc4 type family protein 2.6244e-35
unknown
uagpf_v2_unigene36624 uagpf v2.0 523
AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: family 2 glycosyltransferase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain