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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type, conserved site

Term: IPR017907  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene30840 uagpf v2.0 116
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
unknown
uagpf_v2_unigene30853 uagpf v2.0 355
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
Internal
uagpf_v2_unigene31469 uagpf v2.0 590
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
Blast2go: binding protein 0.0
unknown
uagpf_v2_unigene31694 uagpf v2.0 306
AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene31705 uagpf v2.0 576
AutoFact: Armadillo/beta-catenin repeat protein-like n=2 Tax=Oryza sativa RepID=Q6Z6H7_ORYSJ 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene31957 uagpf v2.0 498
AutoFact: hercules receptor kinase 2 [Arabidopsis thaliana] sp|Q9SA72.1|Y1357_ARATH RecName: Full=Probable receptor-like protein kinase At1g30570; Flags: Precursor gb|AAD25744.1|AC007060_2 Contains eukaryotic protein kinase domain PF|00069 [Arabidopsis thaliana] gb 0.0
Blast2go: probable receptor-like protein kinase at1g30570-like 0.0
unknown
uagpf_v2_unigene32040 uagpf v2.0 756
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0001
Blast2go: photomorphogenesis repressor protein 0.0
Putative coding
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene32180 uagpf v2.0 487
AutoFact: nitric oxide synthase-interacting protein [Arabidopsis thaliana] gb|AAD25548.1|AC005850_5 Unknown protein [Arabidopsis thaliana] gb|AAM62779.1| unknown [Arabidopsis thaliana] gb|AAY57588.1| RING finger family protein [Arabidopsis thaliana] gb|ABG48469.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nitric oxide synthase-interacting protein 0.0
C-terminus
uagpf_v2_unigene32264 uagpf v2.0 420
AutoFact: Abscisic acid receptor PYL4 n=2 Tax=Arabidopsis RepID=PYL4_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abscisic acid receptor pyl4 0.0
C-terminus
uagpf_v2_unigene32315 uagpf v2.0 693
AutoFact: putative RING zinc finger protein [Arabidopsis thaliana] 3.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 7.32764e-29
Putative Complete
uagpf_v2_unigene32842 uagpf v2.0 223
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Oryza sativa subsp. japonica (Rice). 0.0
Internal
uagpf_v2_unigene33078 uagpf v2.0 381
AutoFact: pfam07714, Pkinase_Tyr, Protein tyrosine kinase 4.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase KEG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase keg 7.14662e-43
Internal
uagpf_v2_unigene33178 uagpf v2.0 221
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
uagpf_v2_unigene33373 uagpf v2.0 247
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RJR5_RICCO 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 9.51201e-39
Internal
uagpf_v2_unigene33391 uagpf v2.0 213
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
uagpf_v2_unigene33479 uagpf v2.0 366
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
Blast2go: binding protein 0.0
unknown
uagpf_v2_unigene33525 uagpf v2.0 389
AutoFact: ankyrin repeat-rich protein [Solanum tuberosum] 0.0
FL-Next: sp=E3 ubiquitin-protein ligase XBAT32; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ankyrin repeat-rich protein 0.0
N-terminus
uagpf_v2_unigene33777 uagpf v2.0 158
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: ring finger 0.0
Internal
uagpf_v2_unigene33870 uagpf v2.0 445
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain