Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene38213 uagpf v2.0 523
AutoFact: MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|AAL33648.1|AF440219_1 MSI type nucleosome/chromatin assembly factor C [Zea mays] gb|ACN33308.1| unknown [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
uagpf_v2_unigene38268 uagpf v2.0 410
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: sp=WD-40 repeat-containing protein MSI4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Putative N-terminus
uagpf_v2_unigene38530 uagpf v2.0 263
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-27
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38583 uagpf v2.0 443
AutoFact: putative beige protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beach domain-containing protein lvsa-like 0.0
Internal
uagpf_v2_unigene38722 uagpf v2.0 485
AutoFact: putative WD-repeat protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Topless-related protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38733 uagpf v2.0 354
AutoFact: THO complex subunit 3 [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] gb|AED96724.1| THO complex subunit 3 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene38761 uagpf v2.0 417
AutoFact: pfam02138, Beach, Beige/BEACH domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd40 and beach domain-containing protein 0.0
Internal
uagpf_v2_unigene38768 uagpf v2.0 330
AutoFact: Nucleosome remodeling factor, p48 subunit n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJC1_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
Internal
uagpf_v2_unigene38853 uagpf v2.0 563
AutoFact: anaphase promoting complex subunit 4 [Arabidopsis thaliana] 7.00649e-45
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex subunit 4 0.0
Internal
uagpf_v2_unigene38906 uagpf v2.0 536
AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phospholipase a-2-activating protein 0.0
Internal
uagpf_v2_unigene38989 uagpf v2.0 475
AutoFact: Unassigned protein
unknown
uagpf_v2_unigene39206 uagpf v2.0 264
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAK62612.1| AT5g35570/K2K18_1 [Arabidopsis thaliana] gb|AAM47340.1| AT5g35570/K2K18_1 [Arabidopsis thaliana] gb|AED93982.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39304 uagpf v2.0 462
AutoFact: NLE multi-domain protein 3.0e-12
FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: notchless protein homolog 0.0
N-terminus
uagpf_v2_unigene39339 uagpf v2.0 498
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 8.0e-16
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein topless 3.20395e-16
Internal
uagpf_v2_unigene39380 uagpf v2.0 324
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Internal
uagpf_v2_unigene39401 uagpf v2.0 388
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene39583 uagpf v2.0 495
AutoFact: Metallothio multi-domain protein 1.0e-08
Blast2go: transducin wd40 domain-containing protein 0.0
unknown
uagpf_v2_unigene39663 uagpf v2.0 240
AutoFact: WD-40 repeat protein-like n=7 Tax=Poaceae RepID=Q7EYE2_ORYSJ 2.0e-26
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
Blast2go: ramosa 1 enhancer locus 2 1.38002e-28
Internal
uagpf_v2_unigene39871 uagpf v2.0 377
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001189878.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana] gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis t 6.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.71308e-34
N-terminus
uagpf_v2_unigene39923 uagpf v2.0 370
AutoFact: Cellulose synthase-like protein n=2 Tax=Populus RepID=B9IPJ4_POPTR 0.0
FL-Next: tr=Cellulose synthase catalytic subunit; Pinus taeda (Loblolly pine). 0.0
Blast2go: cellulose synthase-like protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain