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Assembly Name: uagpf v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene34820 uagpf v2.0 334
AutoFact: Unassigned protein
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: vascular protein 0.0
Internal
uagpf_v2_unigene34971 uagpf v2.0 333
AutoFact: O-FucT domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
uagpf_v2_unigene34997 uagpf v2.0 367
AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote 0.0
Blast2go: u3 small nucleolar rna-associated protein 0.0
Putative coding
uagpf_v2_unigene35084 uagpf v2.0 298
AutoFact: actin-related protein C1B [Arabidopsis thaliana] gb|AAL27513.1|AF439845_1 At2g31300/F16D14.14 [Arabidopsis thaliana] gb|AAD20675.1| putative ARP2/3 protein complex subunit p41 [Arabidopsis thaliana] gb|AAN18136.1| At2g31300/F16D14.14 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein c1a 0.0
N-terminus
uagpf_v2_unigene35143 uagpf v2.0 263
AutoFact: Lissencephaly type-1-like homology motif; CTLH, C-terminal to LisH motif; Nitrous oxide reductase, N-terminal; WD40-like; Quinonprotein alcohol dehydrogenase-like [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 3-like 0.0
N-terminus
uagpf_v2_unigene35525 uagpf v2.0 170
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE79079.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd-40 repeat-containing protein 0.0
Internal
uagpf_v2_unigene35580 uagpf v2.0 405
AutoFact: Unassigned protein
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.80898e-26
Internal
uagpf_v2_unigene35588 uagpf v2.0 124
AutoFact: MIP-T3 multi-domain protein 8.0e-16
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box-like wd repeat-containing protein tbl1xr1-like 0.0
Internal
uagpf_v2_unigene35629 uagpf v2.0 238
AutoFact: glycine-rich protein [Arabidopsis thaliana] ref|NP_001190893.1| glycine-rich protein [Arabidopsis thaliana] ref|NP_001190894.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86144.1| glycine-rich protein [Arabidopsis thaliana] gb|AEE86145.1| glycine-r 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene35630 uagpf v2.0 216
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
uagpf_v2_unigene35646 uagpf v2.0 430
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAK44037.1|AF370222_1 unknown protein [Arabidopsis thaliana] gb|AAL15222.1| unknown protein [Arabidopsis thaliana] gb|AEE34229.1| transducin/WD-40 repeat-containing protein [Arabidopsis 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleoporin seh1-like 0.0
N-terminus
uagpf_v2_unigene35792 uagpf v2.0 294
AutoFact: Cellulose synthase-like protein D4 n=2 Tax=Arabidopsis RepID=CSLD4_ARATH 0.0
FL-Next: sp=Cellulose synthase-like protein D4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cellulose synthase-like protein d3-like 0.0
Internal
uagpf_v2_unigene35971 uagpf v2.0 323
AutoFact: Beta transducin-like protein, putative n=1 Tax=Solanum bulbocastanum RepID=Q17U56_SOLBU 2.0e-14
FL-Next: sp=Topless-related protein 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ramosa 1 enhancer locus 2 1.35286e-13
Internal
uagpf_v2_unigene35989 uagpf v2.0 253
AutoFact: coatomer subunit alpha-1 [Arabidopsis thaliana] sp|Q94A40.2|COPA1_ARATH RecName: Full=Coatomer subunit alpha-1; AltName: Full=Alpha-coat protein 1; Short=Alpha-COP 1 gb|AAC28519.1| Strong similarity to coatamer alpha subunit (HEPCOP) homolog gb|U24105 fro 0.0
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Internal
uagpf_v2_unigene36253 uagpf v2.0 363
AutoFact: coatomer complex subunit [Brachypodium sylvaticum] 0.0
FL-Next: sp=Coatomer subunit beta'-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer subunit beta -3 0.0
Internal
uagpf_v2_unigene36398 uagpf v2.0 337
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
C-terminus
uagpf_v2_unigene36420 uagpf v2.0 429
AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
C-terminus
uagpf_v2_unigene36457 uagpf v2.0 419
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
unknown
uagpf_v2_unigene36529 uagpf v2.0 398
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
unknown
uagpf_v2_unigene36588 uagpf v2.0 538
AutoFact: Guanine nucleotide-binding protein subunit beta-1 n=9 Tax=core eudicotyledons RepID=GBB1_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: g protein beta subunit 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain