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Assembly Name: uagpf v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene25960 uagpf v2.0 392
AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-protein pub59 0.0
Internal
uagpf_v2_unigene25994 uagpf v2.0 395
AutoFact: protein TOPLESS [Arabidopsis thaliana] ref|NP_849672.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031050.1| protein TOPLESS [Arabidopsis thaliana] ref|NP_001031051.1| protein TOPLESS [Arabidopsis thaliana] sp|Q94AI7.1|TPL_ARATH RecName: Full=Protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein topless 0.0
N-terminus
uagpf_v2_unigene26103 uagpf v2.0 569
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] ref|NP_850516.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL07141.1| unknown protein [Arabidopsis thaliana] gb|AAM83246.1| AT3g05090/T12H1_5 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 48-like 0.0
Putative C-terminus
uagpf_v2_unigene26110 uagpf v2.0 487
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAL87251.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AAM67522.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AED96732.1| transducin/WD40 domain-containing protein [Ar 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 6.10185e-26
N-terminus
uagpf_v2_unigene26114 uagpf v2.0 462
AutoFact: Unassigned protein
FL-Next: sp=U3 small nucleolar RNA-associated protein 18 homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u3 small nucleolar rna-associated protein 18 homolog 0.0
Internal
uagpf_v2_unigene26174 uagpf v2.0 488
AutoFact: pfam12490, BCAS3, Breast carcinoma amplified sequence 3 4.0e-23
Blast2go: protein 2.43218e-16
unknown
uagpf_v2_unigene26230 uagpf v2.0 481
AutoFact: O-FucT domain containing protein 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
uagpf_v2_unigene26443 uagpf v2.0 419
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AEC06823.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin family protein 0.0
Internal
uagpf_v2_unigene26496 uagpf v2.0 415
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] ref|NP_001190666.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAM20586.1| putative WD-repeat protein [Arabidopsis thaliana] gb|AAN15676.1| putative WD-repeat protei 0.0
FL-Next: sp=LEC14B homolog; Prunus armeniaca (Apricot). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene26642 uagpf v2.0 288
AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 0.0
C-terminus
uagpf_v2_unigene26734 uagpf v2.0 469
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED96505.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: wd repeat-containing protein 25-like 0.0
C-terminus
uagpf_v2_unigene26743 uagpf v2.0 321
AutoFact: peptidylprolyl isomerase domain and WD repeat-containing protein 1 [Arabidopsis thaliana] gb|AAL32731.1| putative protein [Arabidopsis thaliana] gb|AAP37741.1| At3g44600 [Arabidopsis thaliana] gb|AEE77920.1| peptidylprolyl isomerase domain and WD repeat-c 5.0e-08
FL-Next: tr=Putative uncharacterized protein F14L2_150; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
uagpf_v2_unigene26780 uagpf v2.0 368
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene26882 uagpf v2.0 447
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
Blast2go: serine threonine protein phosphatase 0.0
unknown
uagpf_v2_unigene26906 uagpf v2.0 355
AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 4.0e-20
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer subunit alpha-1-like 1.4863e-24
Internal
uagpf_v2_unigene27013 uagpf v2.0 396
AutoFact: WD-40 repeat-containing protein [Nostoc sp. PCC 7120] dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120] 6.0e-12
Blast2go: wd-40 repeat protein 0.0
unknown
uagpf_v2_unigene27043 uagpf v2.0 438
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AAR92280.1| At5g50230 [Arabidopsis thaliana] gb|AAV85684.1| At5g50230 [Arabidopsis thaliana] gb|AED95914.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Notchless protein homolog; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein tipd-like 0.0
Internal
uagpf_v2_unigene27078 uagpf v2.0 466
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana] gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat-containing protein 70-like 0.0
Internal
uagpf_v2_unigene27079 uagpf v2.0 341
AutoFact: WD-repeat protein, putative (EC:2.7.11.7) 3.0e-14
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.70042e-17
N-terminus
uagpf_v2_unigene27209 uagpf v2.0 573
AutoFact: WD repeat and SOF domain-containing protein 1 [Arabidopsis thaliana] gb|AAK50083.1|AF372943_1 AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAK73982.1| AT4g28450/F20O9_130 [Arabidopsis thaliana] gb|AAN28840.1| At4g28450/F20O9_130 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ddb1- and cul4-associated factor 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain