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Assembly Name: uagpf v2.0

Name: WD40/YVTN repeat-like-containing domain

Term: IPR015943  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene19240 uagpf v2.0 1929
• AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
• FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flap endonuclease-1 0.0
Complete
uagpf_v2_unigene19475 uagpf v2.0 461
• AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
• FL-Next: sp=Flap endonuclease 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: flap endonuclease-1 0.0
N-terminus
uagpf_v2_unigene19518 uagpf v2.0 475
• AutoFact: WD-repeat protein, putative 3.0e-10
• FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.45343e-13
C-terminus
uagpf_v2_unigene19684 uagpf v2.0 1733
• AutoFact: tryptophan aminotransferase related 2 [Arabidopsis thaliana] ref|NP_974608.1| tryptophan aminotransferase related 2 [Arabidopsis thaliana] gb|AAK92714.1| putative alliin lyase [Arabidopsis thaliana] gb|AAM14394.1| putative alliin lyase [Arabidopsis thalia 0.0
• FL-Next: sp=Tryptophan aminotransferase-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: alliin lyase 0.0
N-terminus
uagpf_v2_unigene20132 uagpf v2.0 478
• AutoFact: LisH domain containing protein 9.0e-06
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein loc100501624 7.01384e-10
N-terminus
uagpf_v2_unigene24990 uagpf v2.0 430
• AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AED97925.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
• Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
uagpf_v2_unigene25036 uagpf v2.0 529
• AutoFact: Katanin p80 WD40 repeat-containing subunit B1-1 [Arabidopsis thaliana] sp|Q8H0T9.3|KTNB1_ARATH RecName: Full=Katanin p80 WD40 repeat-containing subunit B1 homolog 1 gb|AAN72064.1| putative protein [Arabidopsis thaliana] gb|AED93166.1| Katanin p80 WD40 rep 5.0e-15
• Blast2go: katanin p80 wd40 repeat-containing subunit b1 homolog 1-like 6.4305e-25
unknown
uagpf_v2_unigene25257 uagpf v2.0 269
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rfwd3-like 1.56826e-14
Internal
uagpf_v2_unigene25339 uagpf v2.0 455
• AutoFact: Coatomer alpha subunit-like protein n=2 Tax=Lotus japonicus RepID=Q70I39_LOTJA 9.0e-24
• Blast2go: coatomer alpha subunit 1.40673e-26
unknown
uagpf_v2_unigene25383 uagpf v2.0 372
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 3.0e-27
• FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: wd repeat-containing protein 3-like 4.20189e-30
Putative C-terminus
uagpf_v2_unigene25405 uagpf v2.0 324
• AutoFact: phospholipase A-2-activating protein [Arabidopsis thaliana] gb|AAK95297.1|AF410311_1 AT3g18860/MCB22_3 [Arabidopsis thaliana] dbj|BAB03095.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76160.1| phospholipase A-2-activating protein [Arabidopsis t 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: phospholipase a-2-activating protein 0.0
Internal
uagpf_v2_unigene25432 uagpf v2.0 637
• AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S4H8_RICCO 0.0
• Blast2go: atg18c-like protein 0.0
unknown
uagpf_v2_unigene25472 uagpf v2.0 553
• AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
• FL-Next: sp=Peptidyl-prolyl cis-trans isomerase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Putative C-terminus
uagpf_v2_unigene25522 uagpf v2.0 511
• AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
• Blast2go: cellulose synthase a catalytic subunit 3 0.0
unknown
uagpf_v2_unigene25603 uagpf v2.0 592
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
• Blast2go: glycine-rich protein 0.0
C-terminus
uagpf_v2_unigene25684 uagpf v2.0 424
• AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK92823.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gb|AAN41394.1| putative auxin-independent growth promoter protein [Arabidopsis thaliana] gb|AEE35817.1| O-fuc 0.0
• Blast2go: o-fucosyltransferase-like protein 0.0
unknown
uagpf_v2_unigene25720 uagpf v2.0 510
• AutoFact: Preprotein translocase secA-like protein n=5 Tax=Arabidopsis thaliana RepID=F4HY36_ARATH 2.0e-38
• FL-Next: tr=Putative SecA-type chloroplast protein transport factor; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.82169e-44
C-terminus
uagpf_v2_unigene25727 uagpf v2.0 532
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T0P2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring finger and transmembrane domain-containing protein 2-like 0.0
Internal
uagpf_v2_unigene25803 uagpf v2.0 595
• AutoFact: Neurobeachin, putative n=1 Tax=Ricinus communis RepID=B9RZY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: probable inactive serine threonine-protein kinase lvsg-like 0.0
Putative Complete
uagpf_v2_unigene25814 uagpf v2.0 241
• AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
• Blast2go: protein 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain