Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene36531 uagpf v2.0 458
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rhf2a 0.0
N-terminus
uagpf_v2_unigene36579 uagpf v2.0 394
• AutoFact: E3 ubiquitin-protein ligase ATL23 [Arabidopsis thaliana] sp|Q8L9W3.2|ATL23_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL23; AltName: Full=RING-H2 finger protein ATL23 dbj|BAB08453.1| unnamed protein product [Arabidopsis thaliana] gb|AAO41888.1| unkn 8.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl23 0.0
C-terminus
uagpf_v2_unigene36617 uagpf v2.0 513
• AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: methyltransferase pmt3 0.0
Internal
uagpf_v2_unigene36624 uagpf v2.0 523
• AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: family 2 glycosyltransferase 0.0
Internal
uagpf_v2_unigene36646 uagpf v2.0 440
• AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene36652 uagpf v2.0 303
• AutoFact: E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] ref|NP_001030922.1| E3 ubiquitin ligase BIG BROTHER [Arabidopsis thaliana] sp|Q8L649.1|BB_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER; AltName: Full=Protein ENHANCER OF DA1-1 emb|CAD32249.1| p 0.0
• Blast2go: e3 ubiquitin-protein ligase 0.0
unknown
uagpf_v2_unigene36823 uagpf v2.0 604
• AutoFact: 2x PHD domain containing protein [Cryptosporidium parvum Iowa II] gb|EAK87407.1| 2x PHD domain containing protein [Cryptosporidium parvum Iowa II] 5.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin-protein ligase zinc ion binding protein 0.0
C-terminus
uagpf_v2_unigene36867 uagpf v2.0 378
• AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
• FL-Next: sp=Sulfhydryl oxidase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: quiescin-sulfhydryl oxidase 2 0.0
Internal
uagpf_v2_unigene36869 uagpf v2.0 477
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
unknown
uagpf_v2_unigene36902 uagpf v2.0 494
• AutoFact: Protein ariadne-1, putative n=1 Tax=Ricinus communis RepID=B9RZD6_RICCO 0.0
• Blast2go: protein ariadne- 0.0
unknown
uagpf_v2_unigene36937 uagpf v2.0 474
• AutoFact: zf-rbx1 multi-domain protein 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding protein 0.0
N-terminus
uagpf_v2_unigene36992 uagpf v2.0 394
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
C-terminus
uagpf_v2_unigene37013 uagpf v2.0 429
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: sp=Peroxisome biogenesis factor 10; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: peroxisome biogenesis factor 10-like 0.0
N-terminus
uagpf_v2_unigene37019 uagpf v2.0 462
• AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
• FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI7; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
N-terminus
uagpf_v2_unigene37059 uagpf v2.0 522
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 4.76359e-33
C-terminus
uagpf_v2_unigene37116 uagpf v2.0 471
• AutoFact: C3HC4-type RING finger-containing protein [Arabidopsis thaliana] gb|AEC09620.1| C3HC4-type RING finger-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: inter-alpha-trypsin inhibitor heavy chain h3 0.0
Putative C-terminus
uagpf_v2_unigene37128 uagpf v2.0 393
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDU7_RICCO 5.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase at3g02290-like 1.45997e-32
C-terminus
uagpf_v2_unigene37129 uagpf v2.0 476
• AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene37165 uagpf v2.0 406
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene37202 uagpf v2.0 448
• AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp-dependent helicase brm-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain