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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene34204 uagpf v2.0 212
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 2.99878e-43
• Blast2go: ring u-box domain-containing protein 0.0
unknown
uagpf_v2_unigene34338 uagpf v2.0 275
• AutoFact: RING-H2 finger protein ATL3 n=3 Tax=Arabidopsis RepID=ATL3_ARATH 4.0e-15
• Blast2go: ring-h2 finger protein atl3-like 0.0
unknown
uagpf_v2_unigene34364 uagpf v2.0 111
• AutoFact: RING-H2 finger protein ATL13 [Arabidopsis thaliana] sp|Q940Q4.2|ATL13_ARATH RecName: Full=RING-H2 finger protein ATL13 gb|AEE85760.1| RING-H2 finger protein ATL13 [Arabidopsis thaliana] 1.0e-37
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene34486 uagpf v2.0 197
• AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
• Blast2go: quiescin-sulfhydryl oxidase 2 0.0
unknown
uagpf_v2_unigene34508 uagpf v2.0 214
• AutoFact: WS01041.B21.1_D16 SS-R-N-A-11 Picea sitchensis cDNA clone WS01041_D16 3, mRNA sequence. 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like 2.53227e-31
C-terminus
uagpf_v2_unigene34598 uagpf v2.0 154
• AutoFact: HD domain class transcription factor n=1 Tax=Malus x domestica RepID=D9ZJ13_MALDO 2.0e-12
• FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pathogenesis-related homeodomain protein 1.0688e-15
Internal
uagpf_v2_unigene34671 uagpf v2.0 349
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein binding 0.0
Internal
uagpf_v2_unigene34672 uagpf v2.0 446
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Internal
uagpf_v2_unigene34849 uagpf v2.0 343
• AutoFact: YDG_SRA multi-domain protein 0.0
• Blast2go: zinc finger 0.0
unknown
uagpf_v2_unigene35019 uagpf v2.0 202
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_974832.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAM97093.1| RING finger-like protein [Arabidopsis thaliana] gb|AAT47817.1| At5g24870 [Arabidopsis thaliana] gb|AED9 1.0e-32
• Blast2go: ring u-box domain-containing protein 1.4013e-45
Coding
uagpf_v2_unigene35027 uagpf v2.0 88
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
• Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene35174 uagpf v2.0 331
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene35276 uagpf v2.0 310
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• Blast2go: atp binding 0.0
Coding
uagpf_v2_unigene35310 uagpf v2.0 181
• AutoFact: Cellulose synthase-like D3, glycosyltransferase family 2 protein n=4 Tax=Physcomitrella patens RepID=A9SS17_PHYPA 0.0
• Blast2go: cellulose synthase-like glycosyltransferase family 2 protein 0.0
unknown
uagpf_v2_unigene35345 uagpf v2.0 331
• AutoFact: Serine-threonine protein kinase, plant-type, putative n=1 Tax=Ricinus communis RepID=B9S2F4_RICCO 2.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine-threonine protein plant- 2.48028e-28
Internal
uagpf_v2_unigene35547 uagpf v2.0 259
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RJR5_RICCO 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 9.51201e-39
Internal
uagpf_v2_unigene35792 uagpf v2.0 294
• AutoFact: Cellulose synthase-like protein D4 n=2 Tax=Arabidopsis RepID=CSLD4_ARATH 0.0
• FL-Next: sp=Cellulose synthase-like protein D4; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: cellulose synthase-like protein d3-like 0.0
Internal
uagpf_v2_unigene35800 uagpf v2.0 92
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene35908 uagpf v2.0 246
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAK96689.1| Unknown protein [Arabidopsis thaliana] gb|AAP37763.1| At1g04790 [Arabidopsis thaliana] gb|AEE27744.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 1.99965e-42
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene35910 uagpf v2.0 345
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 3.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain