Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene33157 uagpf v2.0 262
• AutoFact: DNMT1-RFD multi-domain protein 4.0e-18
• Blast2go: enhanced downy mildew 2 0.0
unknown
uagpf_v2_unigene33178 uagpf v2.0 221
• AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 homolog n=2 Tax=Oryza sativa RepID=SGS3_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
Internal
uagpf_v2_unigene33373 uagpf v2.0 247
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9RJR5_RICCO 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 9.51201e-39
Internal
uagpf_v2_unigene33391 uagpf v2.0 213
• AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9S9D0_RICCO 2.0e-21
• FL-Next: sp=Putative uncharacterized protein At4g01020, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein chloroplastic-like 1.73946e-25
Internal
uagpf_v2_unigene33479 uagpf v2.0 366
• AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
• Blast2go: binding protein 0.0
unknown
uagpf_v2_unigene33524 uagpf v2.0 412
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 7.20012e-12
N-terminus
uagpf_v2_unigene33525 uagpf v2.0 389
• AutoFact: ankyrin repeat-rich protein [Solanum tuberosum] 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase XBAT32; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ankyrin repeat-rich protein 0.0
N-terminus
uagpf_v2_unigene33633 uagpf v2.0 316
• AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RSE9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-binding protein chloroplast 0.0
Putative C-terminus
uagpf_v2_unigene33697 uagpf v2.0 419
• AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Internal
uagpf_v2_unigene33777 uagpf v2.0 158
• AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: ring finger 0.0
Internal
uagpf_v2_unigene33804 uagpf v2.0 368
• AutoFact: LRR receptor-like serine/threonine-protein kinase EFR [Arabidopsis thaliana] sp|C0LGT6.1|EFR_ARATH RecName: Full=LRR receptor-like serine/threonine-protein kinase EFR; AltName: Full=Elongation factor Tu receptor; Short=EF-Tu receptor; Flags: Precursor gb| 1.0e-37
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine-threonine protein plant- 4.24958e-41
Internal
uagpf_v2_unigene33810 uagpf v2.0 256
• AutoFact: DWNN domain, a CCHC-type zinc finger [Arabidopsis thaliana] dbj|BAH19619.1| AT5G47430 [Arabidopsis thaliana] gb|AED95508.1| DWNN domain, a CCHC-type zinc finger [Arabidopsis thaliana] 4.0e-15
• FL-Next: tr=Putative uncharacterized protein Sb01g021330; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: retinoblastoma-binding protein 1.4386e-24
N-terminus
uagpf_v2_unigene33860 uagpf v2.0 214
• AutoFact: fiber protein Fb2 [Gossypium barbadense] 3.0e-39
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene33870 uagpf v2.0 445
• AutoFact: DUF221 domain containing protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene33883 uagpf v2.0 409
• AutoFact: C3H4 type zinc finger protein [Arabidopsis thaliana] gb|AEE77301.1| C3H4 type zinc finger protein [Arabidopsis thaliana] 2.0e-28
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc finger family protein 1.50712e-35
Putative C-terminus
uagpf_v2_unigene34027 uagpf v2.0 372
• AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 3.0e-22
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: cohesin loading factor subunit scc2 3.05588e-26
Internal
uagpf_v2_unigene34070 uagpf v2.0 205
• AutoFact: RING Zn-finger domain-containing protein n=1 Tax=Arabidopsis thaliana RepID=F4IK69_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene34091 uagpf v2.0 410
• AutoFact: DUF1262 domain containing protein 2.0e-18
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: protein 8.19569e-35
Internal
uagpf_v2_unigene34118 uagpf v2.0 97
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R7Z4_RICCO 1.0e-29
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene34129 uagpf v2.0 458
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain