Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene1995 uagpf v2.0 567
• AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase BRE1-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Internal
uagpf_v2_unigene2169 uagpf v2.0 1122
• AutoFact: MAD domain containing protein 6.0e-05
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene2196 uagpf v2.0 2308
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ankyrin-like protein 0.0
Putative Complete
uagpf_v2_unigene2280 uagpf v2.0 1034
• AutoFact: Putative RING zinc finger protein n=2 Tax=Arabidopsis RepID=Q9SI09_ARATH 3.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
Complete
uagpf_v2_unigene2283 uagpf v2.0 1190
• AutoFact: C3HC4-type RING finger protein [Arabidopsis thaliana] dbj|BAE98370.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30249.1| C3HC4-type RING finger protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: c3hc4-type ring finger protein 0.0
Complete
uagpf_v2_unigene2284 uagpf v2.0 799
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 1.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
C-terminus
uagpf_v2_unigene2303 uagpf v2.0 623
• AutoFact: protein phosphatase 2C (PP2C) [Fagus sylvatica] 0.0
• Blast2go: protein phosphatase 0.0
unknown
uagpf_v2_unigene2325 uagpf v2.0 770
• AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9R7Z4_RICCO 1.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene2390 uagpf v2.0 780
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• Blast2go: protein 0.0
Coding
uagpf_v2_unigene2426 uagpf v2.0 664
• AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp binding 0.0
Internal
uagpf_v2_unigene2442 uagpf v2.0 674
• AutoFact: [K] COG5175 Transcriptional repressor 1.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
uagpf_v2_unigene2445 uagpf v2.0 623
• AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] gb|AEE31132.1| RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: ring fyve phd zinc finger-containing protein 0.0
Coding
uagpf_v2_unigene2496 uagpf v2.0 504
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 5.0e-26
unknown
uagpf_v2_unigene2547 uagpf v2.0 597
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
N-terminus
uagpf_v2_unigene2580 uagpf v2.0 568
• AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 0.0
• FL-Next: sp=Probable methyltransferase PMT20; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: methyltransferase pmt20 0.0
N-terminus
uagpf_v2_unigene2583 uagpf v2.0 414
• AutoFact: Unassigned protein
• Blast2go: dna binding 0.0
unknown
uagpf_v2_unigene2634 uagpf v2.0 920
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Internal
uagpf_v2_unigene2646 uagpf v2.0 462
• AutoFact: Beta-glucosidase n=1 Tax=Pinus contorta RepID=Q9ZT64_PINCO 8.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.73857e-23
Internal
uagpf_v2_unigene2750 uagpf v2.0 545
• AutoFact: Copine I-like protein n=4 Tax=Oryza RepID=Q6YYC5_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase rglg2-like 0.0
Internal
uagpf_v2_unigene2773 uagpf v2.0 882
• AutoFact: pfam03145, Sina, Seven in absentia protein family 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin ligase 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain