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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene14764 uagpf v2.0 835
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 7.0e-14
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
C-terminus
uagpf_v2_unigene14896 uagpf v2.0 685
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene14949 uagpf v2.0 1807
• AutoFact: PREDICTED: SINA2p isoform 2 [Vitis vinifera] ref|XP_002280243.1| PREDICTED: SINA2p isoform 1 [Vitis vinifera] emb|CAB40578.1| SINA2p [Vitis vinifera] emb|CBI29998.3| unnamed protein product [Vitis vinifera] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase sinat2 0.0
Complete
uagpf_v2_unigene14953 uagpf v2.0 1562
• AutoFact: PREDICTED: similar to thioredoxin-related protein isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001983C70 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: thioredoxin-related protein 0.0
Complete
uagpf_v2_unigene14965 uagpf v2.0 727
• AutoFact: peroxin 10 [Arabidopsis thaliana] sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: peroxisome biogenesis factor 10-like 0.0
Putative N-terminus
uagpf_v2_unigene15064 uagpf v2.0 878
• AutoFact: Zinc finger, RING-type [Medicago truncatula] 9.0e-39
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase atl6-like 0.0
N-terminus
uagpf_v2_unigene15065 uagpf v2.0 506
• AutoFact: putative E3 ubiquitin-protein ligase BAH1-like protein [Arabidopsis thaliana] sp|Q8GW10.1|BAH1L_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase BAH1-like; AltName: Full=RING finger protein 178 dbj|BAC43727.1| unknown protein [Arabidopsis thaliana 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase bah1-like protein 0.0
N-terminus
uagpf_v2_unigene15077 uagpf v2.0 606
• AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 4.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger protein 1.67315e-42
Putative N-terminus
uagpf_v2_unigene15094 uagpf v2.0 649
• AutoFact: RING-H2 finger protein ATL1M, putative n=1 Tax=Ricinus communis RepID=B9T6E5_RICCO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein 0.0
C-terminus
uagpf_v2_unigene15101 uagpf v2.0 487
• AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9T2M9_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene15190 uagpf v2.0 577
• AutoFact: Zinc finger, C3HC4 type family protein n=3 Tax=Andropogoneae RepID=B6SSJ0_MAIZE 1.0e-32
• Blast2go: zinc c3hc4 type family protein 2.6244e-35
Coding
uagpf_v2_unigene15198 uagpf v2.0 569
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW9_RICCO 0.0
• Blast2go: ring u-box domain-containing protein 0.0
unknown
uagpf_v2_unigene15330 uagpf v2.0 512
• AutoFact: thiol oxidoreductase1 [Zea mays] gb|AAW66880.1| thiol oxidoreductase [Zea mays] gb|ACN27863.1| unknown [Zea mays] 0.0
• FL-Next: sp=Sulfhydryl oxidase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: quiescin-sulfhydryl oxidase 2 0.0
Internal
uagpf_v2_unigene15345 uagpf v2.0 579
• AutoFact: pfam12483, GIDE, E3 Ubiquitin ligase 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: mitochondrial ubiquitin ligase activator of nfkb 1-like 0.0
C-terminus
uagpf_v2_unigene15353 uagpf v2.0 877
• AutoFact: Tymo_45kd_70kd multi-domain protein 8.0e-05
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene15357 uagpf v2.0 491
• AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
• Blast2go: family 2 glycosyltransferase 0.0
unknown
uagpf_v2_unigene15422 uagpf v2.0 640
• AutoFact: V-type proton ATPase subunit G n=1 Tax=Citrus limon RepID=VATG_CITLI 9.0e-22
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vacuolar atp synthase subunit g 1.18655e-35
N-terminus
uagpf_v2_unigene15563 uagpf v2.0 946
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SK22_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene15577 uagpf v2.0 918
• AutoFact: nitric oxide synthase-interacting protein [Arabidopsis thaliana] gb|AAD25548.1|AC005850_5 Unknown protein [Arabidopsis thaliana] gb|AAM62779.1| unknown [Arabidopsis thaliana] gb|AAY57588.1| RING finger family protein [Arabidopsis thaliana] gb|ABG48469.1| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nitric oxide synthase-interacting protein 0.0
N-terminus
uagpf_v2_unigene15677 uagpf v2.0 438
• AutoFact: RING-box protein 1a n=7 Tax=rosids RepID=RBX1A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-box protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain