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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13700 uagpf v2.0 220
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene13761 uagpf v2.0 646
AutoFact: Cellulose synthase n=13 Tax=core eudicotyledons RepID=B9IKV7_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
N-terminus
uagpf_v2_unigene13763 uagpf v2.0 631
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF23258.1|AC015985_16 putative RING zinc finger protein [Arabidopsis thaliana] gb|AAF23312.1|AC016661_37 unknown protein [Arabidopsis thaliana] gb|AAL66972.1| putative RING zinc finger protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase mgrn1-like 0.0
C-terminus
uagpf_v2_unigene13768 uagpf v2.0 504
AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: brca1-associated protein 0.0
Putative N-terminus
uagpf_v2_unigene13819 uagpf v2.0 785
AutoFact: fiber protein Fb2 [Gossypium barbadense] 1.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene13854 uagpf v2.0 581
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Internal
uagpf_v2_unigene13888 uagpf v2.0 382
AutoFact: E3 ubiquitin ligase PUB14, putative n=1 Tax=Ricinus communis RepID=B9R6X8_RICCO 9.94922e-44
Blast2go: u-box domain-containing protein 30-like 0.0
Coding
uagpf_v2_unigene13920 uagpf v2.0 586
AutoFact: embryo defective 1379 protein [Arabidopsis thaliana] gb|AAO73901.1| hypothetical protein [Arabidopsis thaliana] gb|AAS76229.1| At5g21140 [Arabidopsis thaliana] gb|AAS92326.1| At5g21140 [Arabidopsis thaliana] gb|AED92939.1| embryo defective 1379 protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: embryo defective 1379 protein 0.0
N-terminus
uagpf_v2_unigene14013 uagpf v2.0 860
AutoFact: pfam08241, Methyltransf_11, Methyltransferase domain 4.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene14015 uagpf v2.0 693
AutoFact: brassinosteroid-responsive RING-H2 [Arabidopsis thaliana] ref|XP_002878382.1| brassinosteroid-responsive ring-H2 [Arabidopsis lyrata subsp. lyrata] gb|AAD27870.1|AF134155_1 BRH1 RING finger protein [Arabidopsis thaliana] emb|CAB71076.1| RING finger protei 1.0e-21
FL-Next: sp=E3 ubiquitin-protein ligase RHA1B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 7.5849e-29
Complete
uagpf_v2_unigene14194 uagpf v2.0 408
AutoFact: fiber protein Fb2 [Gossypium barbadense] 3.0e-39
Blast2go: protein 0.0
unknown
uagpf_v2_unigene14249 uagpf v2.0 816
AutoFact: U-box multi-domain protein 3.0e-17
FL-Next: sp=U-box domain-containing protein 17; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene14273 uagpf v2.0 942
AutoFact: putative tyrosine-protein phosphatase [Arabidopsis thaliana] sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gb|AAO6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tyrosine specific protein phosphatase family protein 0.0
C-terminus
uagpf_v2_unigene14379 uagpf v2.0 1207
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9S0D8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger and chy zinc finger domain-containing protein 1-like 0.0
Complete
uagpf_v2_unigene14522 uagpf v2.0 726
AutoFact: Zinc finger, RING-type n=1 Tax=Medicago truncatula RepID=A2Q4Q8_MEDTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
C-terminus
uagpf_v2_unigene14598 uagpf v2.0 716
AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.6633e-24
Putative N-terminus
uagpf_v2_unigene14602 uagpf v2.0 722
AutoFact: zf-rbx1 multi-domain protein 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
C-terminus
uagpf_v2_unigene14733 uagpf v2.0 715
AutoFact: DUF221 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene14748 uagpf v2.0 361
AutoFact: RING-H2 finger protein ATL68 [Arabidopsis thaliana] sp|Q9M313.1|ATL68_ARATH RecName: Full=RING-H2 finger protein ATL68 gb|AAL16112.1|AF428280_1 AT3g61550/F2A19_150 [Arabidopsis thaliana] emb|CAB71085.1| putative protein [Arabidopsis thaliana] gb|AAM51602. 1.0e-33
FL-Next: sp=Putative RING-H2 finger protein ATL69; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 6.25119e-42
N-terminus
uagpf_v2_unigene14762 uagpf v2.0 629
AutoFact: RING finger-like protein [Oryza sativa Japonica Group] dbj|BAB90773.1| RING finger-like protein [Oryza sativa Japonica Group] dbj|BAG89633.1| unnamed protein product [Oryza sativa Japonica Group] 6.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain