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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene10837 uagpf v2.0 429
AutoFact: vacuolar protein sorting 11 protein [Arabidopsis thaliana] gb|AAL32006.1|AF436824_1 At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AAD29055.1| expressed protein [Arabidopsis thaliana] gb|AAO11614.1| At2g05170/F5G3.7 [Arabidopsis thaliana] gb|AEC05900.1| vacuo 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 11 homolog 0.0
Internal
uagpf_v2_unigene10965 uagpf v2.0 480
AutoFact: [R] COG2319 FOG: WD40 repeat 2.0e-10
Blast2go: protein 0.0
unknown
uagpf_v2_unigene11177 uagpf v2.0 416
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ring u-box domain-containing protein 4.63613e-21
C-terminus
uagpf_v2_unigene11195 uagpf v2.0 641
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL38373.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AAM10083.1| putative RING zinc finger protein [Arabidopsis thaliana] gb|AEC09635.1| RING/U-box domain-containing protein 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger protein 0.0
N-terminus
uagpf_v2_unigene11214 uagpf v2.0 337
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078119.1| RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF20226.1|AC012395_13 putative RING zinc finger protein [Arabidopsis thaliana] gb|AEE74513.1| RING/U-box domain 7.0e-14
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
N-terminus
uagpf_v2_unigene11238 uagpf v2.0 1107
AutoFact: Zinc finger family-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0ZH37_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family-like protein 0.0
Complete
uagpf_v2_unigene11252 uagpf v2.0 343
AutoFact: Protein binding protein n=3 Tax=Andropogoneae RepID=B6SPB5_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein binding protein 0.0
N-terminus
uagpf_v2_unigene11264 uagpf v2.0 671
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 7.00448e-28
C-terminus
uagpf_v2_unigene11270 uagpf v2.0 1442
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAD10644.1| Unknown protein [Arabidopsis thaliana] gb|AAK62663.1| At1g55530/T5A14_7 [Arabidopsis thaliana] gb|AAN18071.1| At1g 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
Complete
uagpf_v2_unigene11316 uagpf v2.0 660
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SH81_RICCO 2.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 8.65302e-42
C-terminus
uagpf_v2_unigene11328 uagpf v2.0 399
AutoFact: putative protein phosphatase 2C 68 [Arabidopsis thaliana] ref|NP_001119181.1| putative protein phosphatase 2C 68 [Arabidopsis thaliana] sp|Q84JD5.1|P2C68_ARATH RecName: Full=Probable protein phosphatase 2C 68; Short=AtPP2C68 gb|AAO42197.1| putative protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 68 0.0
Internal
uagpf_v2_unigene11341 uagpf v2.0 501
AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Putative N-terminus
uagpf_v2_unigene11388 uagpf v2.0 543
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene11405 uagpf v2.0 247
AutoFact: WS0374.C21_B21 SS-B-N-22 Picea sitchensis cDNA clone WS0374_B21 3', mRNA sequence. 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene11533 uagpf v2.0 637
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: Isoform 2 of Transcription factor GTE10 OS=Arabidopsis thaliana GN=GTE10 0.0
Blast2go: nuclear protein x1 0.0
Internal
uagpf_v2_unigene11548 uagpf v2.0 617
AutoFact: Ring finger protein, putative n=1 Tax=Ricinus communis RepID=B9SNU8_RICCO 8.0e-35
Blast2go: ring finger 0.0
Putative coding
uagpf_v2_unigene11567 uagpf v2.0 787
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
unknown
uagpf_v2_unigene11662 uagpf v2.0 491
AutoFact: Putative RING zinc finger protein n=1 Tax=Oryza sativa Japonica Group RepID=Q8S5X9_ORYSJ 1.0e-14
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein ariadne- 2.44575e-16
N-terminus
uagpf_v2_unigene11734 uagpf v2.0 528
AutoFact: ubiquitin-protein ligase RNF14 [Arabidopsis thaliana] gb|AAF81330.1|AC007767_10 Contains similarity to ring finger protein 14 from Homo sapiens gb|NM_004290. It contains an IBR domain PF|01485 [Arabidopsis thaliana] gb|AAG60174.1|AC084110_7 hypothetical p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger 0.0
C-terminus
uagpf_v2_unigene11780 uagpf v2.0 694
AutoFact: Ubiquitin-protein ligase n=1 Tax=Cucumis melo subsp. melo RepID=E5GC73_CUCME 4.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: upf0392 protein rcom_0530710-like 4.56779e-33
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain