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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8558 uagpf v2.0 247
AutoFact: CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] emb|CAB75492.1| putative protein [Arabidopsis thaliana] gb|AEE78053.1| CCR4-NOT transcription complex subunit 4 [Arabidopsis thaliana] 6.0e-29
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 1.16942e-32
Internal
uagpf_v2_unigene8600 uagpf v2.0 771
AutoFact: Probable protein phosphatase 2C 68 n=3 Tax=Brassicaceae RepID=P2C68_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 2c 68 0.0
Putative Complete
uagpf_v2_unigene8791 uagpf v2.0 1247
AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt20 0.0
C-terminus
uagpf_v2_unigene8847 uagpf v2.0 333
AutoFact: CHD3-type chromatin-remodeling factor PICKLE [Arabidopsis thaliana] sp|Q9S775.1|PKL_ARATH RecName: Full=CHD3-type chromatin-remodeling factor PICKLE; AltName: Full=Protein GYMNOS gb|AAF07084.1|AF185578_1 GYMNOS/PICKLE [Arabidopsis thaliana] gb|AAF13875.1| 0.0
FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Internal
uagpf_v2_unigene8897 uagpf v2.0 692
AutoFact: pfam03854, zf-P11, P-11 zinc finger 0.0001
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
C-terminus
uagpf_v2_unigene8979 uagpf v2.0 955
AutoFact: putative peroxin [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Peroxisome biogenesis protein 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene9101 uagpf v2.0 1253
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring zinc finger 0.0
Complete
uagpf_v2_unigene9136 uagpf v2.0 388
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAW80858.1| At5g45290 [Arabidopsis thaliana] gb|AAW80870.1| At5g45290 [Arabidopsis thaliana] gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Internal
uagpf_v2_unigene9145 uagpf v2.0 677
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RCF4_RICCO 4.0e-25
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: e3 ubiquitin-protein ligase rha1b-like 1.75794e-33
N-terminus
uagpf_v2_unigene9204 uagpf v2.0 1104
AutoFact: copine-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase rglg2 0.0
N-terminus
uagpf_v2_unigene9255 uagpf v2.0 356
AutoFact: 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4] gb|EAL72312.1| 7-fold repeat in clathrin and VPS proteins repeat-containing protein [Dictyostelium discoideum AX4] 7.0e-40
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: vacuolar protein sorting-associated protein 18 homolog 0.0
Internal
uagpf_v2_unigene9298 uagpf v2.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring finger protein 0.0
Complete
uagpf_v2_unigene9374 uagpf v2.0 1132
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
C-terminus
uagpf_v2_unigene9415 uagpf v2.0 844
AutoFact: Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] gb|AEE35529.1| Transmembrane Fragile-X-F-associated protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transmembrane fragile-x-f-associated protein 0.0
Internal
uagpf_v2_unigene9485 uagpf v2.0 354
AutoFact: P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] dbj|BAB71851.1| kinesin-related protein [Arabidopsis thaliana] gb|AEE30148.1| P-loop containing nucleoside triphosphate hydrolase-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Kinesin heavy chain, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene9504 uagpf v2.0 501
AutoFact: C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD31446.1| C3HC4-type RING zinc finger protein-like [Oryza sativa Japonica Group] 9.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.7995e-24
Internal
uagpf_v2_unigene9588 uagpf v2.0 328
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene9618 uagpf v2.0 747
AutoFact: E3 ubiquitin-protein ligase XBAT33 [Arabidopsis thaliana] sp|Q4FE45.1|XB33_ARATH RecName: Full=E3 ubiquitin-protein ligase XBAT33; AltName: Full=Ankyrin repeat domain and RING finger-containing protein XBAT33; AltName: Full=Protein XB3 homolog 3 gb|AAZ140 0.0
FL-Next: sp=E3 ubiquitin-protein ligase XBAT33; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase xbat33-like 0.0
Internal
uagpf_v2_unigene9639 uagpf v2.0 556
AutoFact: putative tyrosine-protein phosphatase [Arabidopsis thaliana] sp|Q9ZVN4.1|Y1500_ARATH RecName: Full=Probable tyrosine-protein phosphatase At1g05000 gb|AAC97999.1| ESTs gb|H36249, gb|AA59732 and gb|AA651219 come from this gene [Arabidopsis thaliana] gb|AAO6 0.0
Blast2go: tyrosine specific protein phosphatase family protein 0.0
unknown
uagpf_v2_unigene9845 uagpf v2.0 650
AutoFact: FANCL_C multi-domain protein 1.0e-06
FL-Next: sp=E3 ubiquitin-protein ligase listerin; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase listerin-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain