Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Zinc finger, RING-type

Term: IPR001841  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene7802 uagpf v2.0 688
• AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal
uagpf_v2_unigene7854 uagpf v2.0 673
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9RUA7_RICCO 1.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring finger 1 3.99746e-35
C-terminus
uagpf_v2_unigene7866 uagpf v2.0 745
• AutoFact: Cellulose synthase (Fragment) n=1 Tax=Pinus radiata RepID=Q4VWW6_PINRA 0.0
unknown
uagpf_v2_unigene7884 uagpf v2.0 373
• AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Coding
uagpf_v2_unigene7937 uagpf v2.0 435
• AutoFact: RING-H2 finger protein ATL73 [Arabidopsis thaliana] sp|Q9FLC6.1|ATL73_ARATH RecName: Full=RING-H2 finger protein ATL73; Flags: Precursor dbj|BAB09971.1| RING zinc finger protein-like [Arabidopsis thaliana] gb|AED90850.1| RING-H2 finger protein ATL73 [Arab 2.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein atl72-like 0.0
C-terminus
uagpf_v2_unigene7988 uagpf v2.0 407
• AutoFact: Makorin-1, putative n=1 Tax=Ricinus communis RepID=B9SL96_RICCO 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase makorin; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: ccch-type zinc finger protein c3h69 0.0
N-terminus
uagpf_v2_unigene8005 uagpf v2.0 1031
• AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8010 uagpf v2.0 711
• AutoFact: RING protein n=1 Tax=Elaeis guineensis RepID=E3SER9_ELAGV 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-h2 finger protein rhy1a 0.0
Internal
uagpf_v2_unigene8042 uagpf v2.0 436
• AutoFact: E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana] sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3 ubiquitin-protein ligase RING1-like; AltName: Full=RING finger protein 1 gb|AAM19951.1| AT3g19950/MPN9_19 [Arabidopsis thaliana] gb|AAN18152.1| 1.0e-33
• Blast2go: ring finger protein 0.0
unknown
uagpf_v2_unigene8134 uagpf v2.0 373
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ring-finger domain-containing protein 0.0
Internal
uagpf_v2_unigene8171 uagpf v2.0 623
• AutoFact: cellulose synthase 6 [Eucalyptus grandis] 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene8238 uagpf v2.0 873
• AutoFact: e-cadherin binding protein-like protein [Arabidopsis thaliana] emb|CAB69844.1| putative protein [Arabidopsis thaliana] gb|ABD59082.1| At5g01160 [Arabidopsis thaliana] dbj|BAE99278.1| hypothetical protein [Arabidopsis thaliana] gb|AED90305.1| e-cadherin bi 6.0e-33
• FL-Next: tr=At5g01160; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 1.71659e-42
N-terminus
uagpf_v2_unigene8247 uagpf v2.0 1469
• AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative C-terminus
uagpf_v2_unigene8291 uagpf v2.0 973
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: ring u-box domain-containing protein 0.0
N-terminus
uagpf_v2_unigene8305 uagpf v2.0 411
• AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_001078409.1| RING/U-box domain-containing protein [Arabidopsis thaliana] emb|CAA19684.1| putative protein [Arabidopsis thaliana] emb|CAB78969.1| putative protein [Arabidopsis thaliana] gb| 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene8315 uagpf v2.0 329
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9T0P5_RICCO 3.00018e-42
• Blast2go: zinc finger 0.0
Coding
uagpf_v2_unigene8406 uagpf v2.0 644
• AutoFact: TED3; TED3 (REVERSAL OF THE DET PHENOTYPE 3); protein binding / zinc ion binding; K06664 peroxin-2 0.0
• FL-Next: sp=Peroxisome biogenesis protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene8443 uagpf v2.0 664
• AutoFact: DUF616 domain containing protein 0.0
• FL-Next: tr=AT5g42660/MJB21_3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
uagpf_v2_unigene8471 uagpf v2.0 419
• AutoFact: cellulose synthase 6 [Populus tremuloides] 0.0
• FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: cellulose synthase 0.0
C-terminus
uagpf_v2_unigene8549 uagpf v2.0 319
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9R796_RICCO 9.80909e-45
• Blast2go: protein binding 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain