Sustainpine_db
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Assembly Name: uagpf v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene12 uagpf v2.0 1272
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase-like protein 0.0
C-terminus
uagpf_v2_unigene72 uagpf v2.0 351
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9T1J5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nucleotide binding 0.0
Internal
uagpf_v2_unigene116 uagpf v2.0 808
AutoFact: transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] gb|AAR28022.1| TAF5 [Arabidopsis thaliana] gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor tfiid subunit 5-like 0.0
C-terminus
uagpf_v2_unigene131 uagpf v2.0 655
AutoFact: peptidyl-prolyl cis-trans isomerase SDCCAG10 [Arabidopsis thaliana] gb|AAS75308.1| multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase [Arabidopsis thaliana] gb|ABF57285.1| At4g33060 [Arabidopsis thaliana] gb|AEE86168.1| peptidyl-prolyl cis-t 0.0
FL-Next: sp=Peptidyl-prolyl cis-trans isomerase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans 0.0
N-terminus
uagpf_v2_unigene197 uagpf v2.0 1593
AutoFact: splicing factor 3B subunit 3 [Arabidopsis thaliana] ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gb|AEE79 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene531 uagpf v2.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: beach domain-containing protein lvsa-like 0.0
Internal
uagpf_v2_unigene608 uagpf v2.0 184
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene642 uagpf v2.0 880
AutoFact: Ser/Thr specific protein phosphatase 2A B regulatory subunit beta isoform n=3 Tax=rosids RepID=Q9FVD4_MEDSV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene658 uagpf v2.0 416
AutoFact: protein transport protein SEC31 [Arabidopsis thaliana] gb|AAM20553.1| putative protein [Arabidopsis thaliana] gb|AAP37794.1| At3g63460 [Arabidopsis thaliana] gb|AEE80486.1| protein transport protein SEC31 [Arabidopsis thaliana] 4.0e-23
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein transport protein sec31 5.79639e-27
N-terminus
uagpf_v2_unigene685 uagpf v2.0 826
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Putative N-terminus
uagpf_v2_unigene980 uagpf v2.0 480
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9R702_RICCO 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna excision repair protein ercc-8-like 0.0
C-terminus
uagpf_v2_unigene1004 uagpf v2.0 553
AutoFact: Nucleosome/chromatin assembly factor group n=7 Tax=core eudicotyledons RepID=A9PHH9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
N-terminus
uagpf_v2_unigene1081 uagpf v2.0 538
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: angio-associated migratory cell 0.0
Internal
uagpf_v2_unigene1155 uagpf v2.0 471
AutoFact: Zinc finger CCCH domain-containing protein 17 n=4 Tax=Oryza sativa RepID=C3H17_ORYSJ 0.0
Blast2go: zinc finger ccch domain-containing protein 48 0.0
unknown
uagpf_v2_unigene1312 uagpf v2.0 1574
AutoFact: WD repeat-containing protein 61 [Arabidopsis thaliana] emb|CAB43658.1| putative protein [Arabidopsis thaliana] emb|CAB79741.1| putative protein [Arabidopsis thaliana] gb|AAP37692.1| At4g29830 [Arabidopsis thaliana] gb|AEE85683.1| WD repeat-containing prot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene1333 uagpf v2.0 780
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAB02026.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65008.1| WD-repeat protein, putative [Arabidopsis thaliana] gb|AAN86145.1| putative WD-repeat protein [Arabidopsis thalia 0.0
Blast2go: protein lst8 homolog 0.0
unknown
uagpf_v2_unigene1480 uagpf v2.0 864
AutoFact: Unassigned protein
FL-Next: Isoform 1 of Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 0.0
C-terminus
uagpf_v2_unigene1493 uagpf v2.0 457
AutoFact: WD-40 repeat-containing protein MSI1 n=8 Tax=core eudicotyledons RepID=MSI1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: multicopy suppressor of ira1 0.0
N-terminus
uagpf_v2_unigene1502 uagpf v2.0 700
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAL86002.1| unknown protein [Arabidopsis thaliana] gb|AAN71963.1| unknown protein [Arabidopsis thaliana] gb|AEE35239.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: angio-associated migratory cell 0.0
C-terminus
uagpf_v2_unigene1505 uagpf v2.0 378
AutoFact: SEC12-like protein 1 [Arabidopsis thaliana] sp|Q8GYE0.2|PHF1_ARATH RecName: Full=SEC12-like protein 1; AltName: Full=Protein PHOSPHATE TRANSPORTER TRAFFIC FACILITATOR 1; Short=PHF-1 emb|CAB41339.1| putative protein [Arabidopsis thaliana] gb|ABI49462.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: sec12-like protein 1-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain