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Assembly Name: uagpf v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene51468 uagpf v2.0 608
AutoFact: transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] gb|AAM13156.1| unknown protein [Arabidopsis thaliana] gb|AAN15609.1| unknown protein [Arabidopsis thaliana] gb|AEE29984.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transducin family protein 0.0
C-terminus
uagpf_v2_unigene51491 uagpf v2.0 468
AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
FL-Next: tr=Tyrosyl-tRNA synthetase; Zea mays (Maize). 0.0
Blast2go: tyrosyl-trna synthetase 0.0
C-terminus
uagpf_v2_unigene51578 uagpf v2.0 329
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene51607 uagpf v2.0 433
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
Internal
uagpf_v2_unigene51622 uagpf v2.0 349
AutoFact: O-fucosyltransferase-like protein [Arabidopsis thaliana] gb|AAK25969.1|AF360259_1 putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAN71964.1| putative axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AEC09474.1| O-fuc 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene51634 uagpf v2.0 246
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9T1Y8_RICCO 0.0
Blast2go: ddb1- and cul4-associated factor 8-like 0.0
unknown
uagpf_v2_unigene51700 uagpf v2.0 243
AutoFact: WD-repeat protein GhTTG2 [Gossypium hirsutum] gb|AAM95644.1| WD-repeat protein GhTTG2 [Gossypium hirsutum] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene51840 uagpf v2.0 377
AutoFact: NLE multi-domain protein 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: notchless protein homolog 0.0
Putative Complete
uagpf_v2_unigene52086 uagpf v2.0 439
AutoFact: peroxisomal targeting signal type 2 receptor [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peroxin 7 0.0
C-terminus
uagpf_v2_unigene52280 uagpf v2.0 549
AutoFact: [R] COG2319 FOG: WD40 repeat 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: wd repeat domain phosphoinositide-interacting protein 0.0
Internal
uagpf_v2_unigene52334 uagpf v2.0 282
AutoFact: Cellulose synthase n=1 Tax=Pinus radiata RepID=Q4VWW7_PINRA 0.0
FL-Next: tr=Cellulose synthase; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
Blast2go: cellulose synthase 0.0
Internal
uagpf_v2_unigene52400 uagpf v2.0 468
AutoFact: Unassigned protein
Blast2go: protein 0.0
unknown
uagpf_v2_unigene52414 uagpf v2.0 269
AutoFact: PREDICTED: HIV-1 Vpr binding protein, partial [Bos taurus] 0.0
Blast2go: protein 0.0
Coding
uagpf_v2_unigene52443 uagpf v2.0 280
AutoFact: WD-repeat protein [Arabidopsis arenosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene52458 uagpf v2.0 302
AutoFact: THO complex subunit 3 [Arabidopsis thaliana] dbj|BAB09295.1| unnamed protein product [Arabidopsis thaliana] gb|AAM13119.1| unknown protein [Arabidopsis thaliana] gb|AAN15493.1| unknown protein [Arabidopsis thaliana] gb|AED96724.1| THO complex subunit 3 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tho complex subunit 3 0.0
Putative C-terminus
uagpf_v2_unigene52462 uagpf v2.0 233
AutoFact: Unassigned protein
FL-Next: sp=Protein TOPLESS; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 4.19833e-35
Internal
uagpf_v2_unigene52522 uagpf v2.0 383
AutoFact: WD-repeat protein, putative 3.0e-10
FL-Next: sp=Topless-related protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.45343e-13
Internal
uagpf_v2_unigene52602 uagpf v2.0 714
AutoFact: Fertilization-independent endosperm (Fragment) n=2 Tax=Hieracium RepID=B1ABR5_HIEPL 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fertilization-independent endosperm protein 0.0
Putative N-terminus
uagpf_v2_unigene52941 uagpf v2.0 404
AutoFact: protein transport SEC13-like protein [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein sec13 homolog 0.0
N-terminus
uagpf_v2_unigene52950 uagpf v2.0 427
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9RJH4_RICCO 1.4013e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain