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Assembly Name: uagpf v2.0

Name: WD40 repeat

Term: IPR001680  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene45744 uagpf v2.0 366
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
uagpf_v2_unigene45775 uagpf v2.0 393
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: topless-related protein 4 9.8361e-21
Internal
uagpf_v2_unigene45838 uagpf v2.0 272
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AED90947.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene46037 uagpf v2.0 301
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.12104e-44
Internal
uagpf_v2_unigene46038 uagpf v2.0 470
AutoFact: pfam12896, Apc4, Anaphase-promoting complex, cyclosome, subunit 4 4.0e-08
FL-Next: sp=Anaphase-promoting complex subunit 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: anaphase-promoting complex subunit 4 2.20414e-16
Internal
uagpf_v2_unigene46081 uagpf v2.0 271
AutoFact: Unassigned protein
FL-Next: tr=Breast carcinoma amplified sequence 3-like protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: breast carcinoma amplified sequence 3-like protein 3.94994e-14
C-terminus
uagpf_v2_unigene46107 uagpf v2.0 334
AutoFact: p450 domain containing protein 6.0e-06
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: vascular protein 0.0
Internal
uagpf_v2_unigene46110 uagpf v2.0 368
AutoFact: Serine/threonine-protein phosphatase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TP64_VITVI 0.0
FL-Next: sp=Serine/threonine-protein phosphatase BSL1 homolog; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: serine threonine protein phosphatase 0.0
Internal
uagpf_v2_unigene46160 uagpf v2.0 421
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDD1_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene46193 uagpf v2.0 258
AutoFact: FVE n=2 Tax=Papilionoideae RepID=Q52ZH8_PEA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleosome chromatin assembly factor group 0.0
N-terminus
uagpf_v2_unigene46316 uagpf v2.0 357
AutoFact: coatomer alpha subunit-like protein [Lotus japonicus] 0.0
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
uagpf_v2_unigene46402 uagpf v2.0 357
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
uagpf_v2_unigene46408 uagpf v2.0 152
AutoFact: Nucleotide binding protein, putative n=1 Tax=Ricinus communis RepID=B9SGV7_RICCO 2.0e-22
FL-Next: tr=Nucleotide binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: enhancer of mrna-decapping protein 4-like 3.03818e-22
Internal
uagpf_v2_unigene46414 uagpf v2.0 359
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
Blast2go: phosphoenolpyruvate carboxykinase 0.0
unknown
uagpf_v2_unigene46461 uagpf v2.0 350
AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear 0.0
FL-Next: sp=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like 0.0
Internal
uagpf_v2_unigene46615 uagpf v2.0 390
AutoFact: phosphorylase family protein [Arabidopsis thaliana] dbj|BAC43650.1| unknown protein [Arabidopsis thaliana] gb|AAO63378.1| At4g24340 [Arabidopsis thaliana] gb|AEE84891.1| phosphorylase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphorylase family protein 0.0
Internal
uagpf_v2_unigene46649 uagpf v2.0 217
AutoFact: [R] COG2319 FOG: WD40 repeat 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.92502e-31
Putative C-terminus
uagpf_v2_unigene46692 uagpf v2.0 359
AutoFact: Glycosyltransferase, CAZy family GT2 n=5 Tax=rosids RepID=B9N113_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cellulose synthase-like protein 0.0
Internal
uagpf_v2_unigene46871 uagpf v2.0 288
AutoFact: cell cycle arrest protein BUB3 [Arabidopsis thaliana] dbj|BAB02543.1| mitotic checkpoint protein [Arabidopsis thaliana] gb|AAM64953.1| mitotic checkpoint protein, putative [Arabidopsis thaliana] gb|AAO42274.1| putative mitotic checkpoint protein [Arabidop 2.94273e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitotic checkpoint protein bub3 0.0
Internal
uagpf_v2_unigene46882 uagpf v2.0 432
AutoFact: Tyrosyl-tRNA synthetase n=3 Tax=Zea mays RepID=B6T638_MAIZE 0.0
Blast2go: tyrosyl-trna synthetase 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain