Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Parallel beta-helix repeat

Term: IPR006626  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene28674 uagpf v2.0 476
AutoFact: Os01g0618900 protein n=2 Tax=Oryza sativa RepID=Q5ZBG4_ORYSJ 2.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 5.99539e-13
Internal
uagpf_v2_unigene29536 uagpf v2.0 403
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
uagpf_v2_unigene30472 uagpf v2.0 401
AutoFact: pectate lyase [Fragaria x ananassa] 0.0
Blast2go: pectate lyase 0.0
unknown
uagpf_v2_unigene32231 uagpf v2.0 99
AutoFact: flocculin [Trichomonas vaginalis G3] gb|EAX95321.1| flocculin, putative [Trichomonas vaginalis G3] 1.0e-13
unknown
uagpf_v2_unigene33081 uagpf v2.0 521
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-17
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polygalacturonase qrt3-like 1.56974e-21
Internal
uagpf_v2_unigene34462 uagpf v2.0 381
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana] emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana] gb|AAL32775.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoside hydrolase family 28 protein 0.0
Internal
uagpf_v2_unigene35892 uagpf v2.0 237
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 2.0e-35
FL-Next: sp=Polygalacturonase QRT3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene36170 uagpf v2.0 606
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AAG40344.1|AF324992_1 AT3g62110 [Arabidopsis thaliana] gb|AAN31866.1| unknown protein [Arabidopsis thaliana] gb|AEE80311.1| glycoside hydrolase 0.0
Blast2go: probable polygalacturonase-like 0.0
unknown
uagpf_v2_unigene38287 uagpf v2.0 380
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Internal
uagpf_v2_unigene39883 uagpf v2.0 362
AutoFact: Pectin lyase-like protein n=2 Tax=Arabidopsis RepID=Q9CAL5_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
C-terminus
uagpf_v2_unigene40270 uagpf v2.0 390
AutoFact: pectate lyase [Salix gilgiana] 5.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pectate lyase 2.08297e-35
Internal
uagpf_v2_unigene41245 uagpf v2.0 295
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
Internal
uagpf_v2_unigene41417 uagpf v2.0 422
AutoFact: Polygalacturonase n=1 Tax=Citrus sinensis RepID=A2IB56_CITSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polygalacturonase 0.0
N-terminus
uagpf_v2_unigene41446 uagpf v2.0 336
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein F15B8.20; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene44042 uagpf v2.0 455
AutoFact: Polygalacturonase QRT3 [Arabidopsis thaliana] ref|NP_001078410.1| Polygalacturonase QRT3 [Arabidopsis thaliana] sp|O49432.1|QRT3_ARATH RecName: Full=Polygalacturonase QRT3; Short=AtQRT3; Short=PG QRT3; AltName: Full=Pectinase QRT3; AltName: Full=Protein Q 0.0
Blast2go: polygalacturonase qrt3 0.0
Putative coding
uagpf_v2_unigene44489 uagpf v2.0 332
AutoFact: Glucose-1-phosphate adenylyltransferase n=2 Tax=Picea sitchensis RepID=B8LNV7_PICSI 0.0
FL-Next: sp=Glucose-1-phosphate adenylyltransferase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-glucose pyrophosphorylase 0.0
C-terminus
uagpf_v2_unigene45469 uagpf v2.0 172
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SKQ4.1|PP167_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g21090 gb|AAD29807.1| unknown protein [Arabidopsis thaliana] gb|AEC07122.1| pentatricopeptide repeat-co 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene46317 uagpf v2.0 240
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Putative coding
uagpf_v2_unigene46328 uagpf v2.0 333
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9RR75_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Putative N-terminus
uagpf_v2_unigene46816 uagpf v2.0 372
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] gb|AEE79701.1| glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain