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Assembly Name: uagpf v2.0

Name: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

Term: IPR000194  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene29956 uagpf v2.0 443
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] gb|AAF79455.1|AC025808_37 F18O14.3 [Arabidopsis thaliana] gb|AAL15335.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM51593.1| At1g19310/F18O14_14 [Arabidopsis thaliana] gb|AAM62463.1| unknow 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene30035 uagpf v2.0 356
AutoFact: RVT_1 domain containing protein 5.0e-16
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein partial 6.78913e-33
Putative C-terminus
uagpf_v2_unigene30060 uagpf v2.0 508
AutoFact: Dof domain zinc finger DNA-binding protein n=1 Tax=Picea abies RepID=Q14DX9_PICAB 5.0e-31
Blast2go: f-box family protein 6.92407e-34
Coding
uagpf_v2_unigene30166 uagpf v2.0 324
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene30187 uagpf v2.0 398
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Picea sitchensis RepID=D5A9Z6_PICSI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Internal
uagpf_v2_unigene30216 uagpf v2.0 210
AutoFact: putative ubiquitin-specific protease [Oryza sativa Japonica Group] 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase 16-like 0.0
Coding
uagpf_v2_unigene30507 uagpf v2.0 439
AutoFact: Os03g0374575 protein n=4 Tax=Oryza sativa RepID=C7J0R1_ORYSJ 6.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif family expressed 8.50075e-29
N-terminus
uagpf_v2_unigene30547 uagpf v2.0 343
AutoFact: DUF632 domain containing protein 0.0
Blast2go: uncharacterized protein 0.0
unknown
uagpf_v2_unigene30617 uagpf v2.0 620
AutoFact: 3-ketoacyl-CoA synthase n=4 Tax=rosids RepID=A9PEC4_POPTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Putative N-terminus
uagpf_v2_unigene30693 uagpf v2.0 447
AutoFact: Kinase, putative n=1 Tax=Ricinus communis RepID=B9SDY6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: l-type lectin-domain containing receptor kinase -like 0.0
Putative C-terminus
uagpf_v2_unigene30705 uagpf v2.0 360
AutoFact: SWI/SNF complex subunit SWI3B [Arabidopsis thaliana] sp|Q84JG2.1|SWI3B_ARATH RecName: Full=SWI/SNF complex subunit SWI3B; Short=AtSWI3B; AltName: Full=Transcription regulatory protein SWI3B gb|AAO42112.1| putative SWI/SNF complex subunit SW13 [Arabidopsis 1.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf complex subunit swi3b 0.0
Internal
uagpf_v2_unigene30914 uagpf v2.0 205
AutoFact: ATP binding protein n=2 Tax=Andropogoneae RepID=B6U8H2_MAIZE 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene31007 uagpf v2.0 280
AutoFact: Autoinhibited calcium ATPase n=2 Tax=Populus trichocarpa RepID=B9HK60_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: autoinhibited calcium atpase 0.0
Internal
uagpf_v2_unigene31260 uagpf v2.0 273
AutoFact: Kinesin heavy chain, putative n=1 Tax=Ricinus communis RepID=B9T5B8_RICCO 0.0
Blast2go: kinesin heavy 0.0
Putative coding
uagpf_v2_unigene31446 uagpf v2.0 701
AutoFact: putative Cdc2-related protein kinase CRK2 [Beta vulgaris] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin-dependent kinase f-4-like 0.0
N-terminus
uagpf_v2_unigene31655 uagpf v2.0 328
AutoFact: putative serine/threonine protein kinase [Arabidopsis thaliana] gb|AAK25900.1|AF360190_1 putative kinase [Arabidopsis thaliana] gb|AAK64081.1| putative kinase [Arabidopsis thaliana] gb|AEE84141.1| putative serine/threonine protein kinase [Arabidopsis thal 0.0
Blast2go: cyclin-dependent kinase f-4-like 0.0
unknown
uagpf_v2_unigene32102 uagpf v2.0 738
AutoFact: pleckstrin homology (PH) and lipid-binding START domain-containing protein [Arabidopsis thaliana] gb|AEC08107.1| pleckstrin homology (PH) and lipid-binding START domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pleckstrin homology and lipid-binding start domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene32136 uagpf v2.0 648
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
Blast2go: dna helicase ino80-like 0.0
Putative coding
uagpf_v2_unigene32184 uagpf v2.0 472
AutoFact: DUF581 domain containing protein 3.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene32212 uagpf v2.0 424
AutoFact: OSJNBa0017P10.4 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XQ51_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: retrotransposon ty3-gypsy subclass 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain