Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: uagpf v2.0

Name: Leucine-rich repeat 3

Term: IPR011713  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene1894 uagpf v2.0 996
AutoFact: Copia-type polyprotein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C536_ARATH 9.80909e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 0.0
C-terminus
uagpf_v2_unigene2578 uagpf v2.0 1118
AutoFact: ATP-binding cassette transporter, subfamily G, member 4, group WBC protein PpABCG4 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCA8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter g family member 22-like 0.0
C-terminus
uagpf_v2_unigene3824 uagpf v2.0 400
AutoFact: Copia-type reverse transcriptase-like protein n=1 Tax=Arabidopsis thaliana RepID=Q9M197_ARATH 0.0
Blast2go: retrotransposon unclassified 0.0
Putative coding
uagpf_v2_unigene4265 uagpf v2.0 474
AutoFact: NBS-LRR disease resistance protein homologue [Hordeum vulgare] 2.0e-13
Blast2go: protein 1.41426e-18
unknown
uagpf_v2_unigene5264 uagpf v2.0 437
AutoFact: [B] COG5602 Histone deacetylase complex, SIN3 component 9.0e-34
Blast2go: paired amphipathic helix protein sin3-like 4-like 0.0
unknown
uagpf_v2_unigene5386 uagpf v2.0 758
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 0.0
Blast2go: atp binding 0.0
unknown
uagpf_v2_unigene6988 uagpf v2.0 557
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitogen activated protein kinase kinase kinase 0.0
Putative Complete
uagpf_v2_unigene7523 uagpf v2.0 593
AutoFact: plant intracellular ras group-related LRR 1 [Arabidopsis thaliana] dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana] gb|AAU95419.1| At5g05850 [Arabidopsis thaliana] gb|AAV59262.1| At5g05850 [Arabidopsis thaliana] gb|AAW57410.1| plant intracel 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: leucine-rich repeat-containing 0.0
C-terminus
uagpf_v2_unigene8337 uagpf v2.0 636
AutoFact: ATP-binding cassette transporter (Fragment) n=2 Tax=Selaginella moellendorffii RepID=D8T898_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal
uagpf_v2_unigene8879 uagpf v2.0 447
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene9327 uagpf v2.0 273
AutoFact: Mitogen activated protein kinase kinase kinase 3, mapkkk3, mekk3, putative n=1 Tax=Ricinus communis RepID=B9RTY0_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene9980 uagpf v2.0 353
AutoFact: Ran GTPase binding protein, putative n=1 Tax=Ricinus communis RepID=B9SJF7_RICCO 5.00264e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lateral signaling target protein 0.0
Internal
uagpf_v2_unigene12339 uagpf v2.0 497
AutoFact: [S] COG4886 Leucine-rich repeat (LRR) protein 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.509e-37
Complete
uagpf_v2_unigene13612 uagpf v2.0 689
AutoFact: copia-type reverse transcriptase-like protein [Arabidopsis thaliana] 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: copia-type polyprotein 3.58732e-43
C-terminus
uagpf_v2_unigene16587 uagpf v2.0 813
AutoFact: WRKY transcription factor PmWRKY108 (Fragment) n=2 Tax=Pinus monticola RepID=E6Y3E0_PINMO 0.0
Blast2go: wrky transcription factor 0.0
Coding
uagpf_v2_unigene16804 uagpf v2.0 559
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 1.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 5.1806e-42
Putative N-terminus
uagpf_v2_unigene19258 uagpf v2.0 663
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene24967 uagpf v2.0 503
AutoFact: Transcription factor, putative n=1 Tax=Ricinus communis RepID=B9RCK4_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene25088 uagpf v2.0 528
AutoFact: Putative TIR/NBS/LRR disease resistance protein (Fragment) n=1 Tax=Pinus taeda RepID=Q8L8I7_PINTA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene25200 uagpf v2.0 451
AutoFact: NBS-LRR disease resistance protein homologue [Hordeum vulgare] 2.0e-13
Blast2go: protein 1.41426e-18
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain