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Assembly Name: uagpf v2.0

Name: DHBP synthase RibB-like alpha/beta domain

Term: IPR017945  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene2998 uagpf v2.0 728
AutoFact: zinc finger (C3HC4 type RING finger) family protein [Musa acuminata] 0.0
FL-Next: tr=Zinc finger (C3HC4 type RING finger) family protein; Musa acuminata (Banana) (Musa cavendishii). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Putative C-terminus
uagpf_v2_unigene5569 uagpf v2.0 828
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: ischemia reperfusion inducible protein 0.0
C-terminus
uagpf_v2_unigene8841 uagpf v2.0 395
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene16231 uagpf v2.0 1330
AutoFact: GTP cyclohydrolase-2 [Arabidopsis thaliana] sp|P47924.2|RIBBA_ARATH RecName: Full=Riboflavin biosynthesis protein ribBA, chloroplastic; Includes: RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; Includes: RecName: Full=GTP 0.0
FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: riboflavin biosynthesis protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene27906 uagpf v2.0 442
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Putative coding
uagpf_v2_unigene31880 uagpf v2.0 617
AutoFact: [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.0
FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp cyclohydrolase 0.0
Putative N-terminus
uagpf_v2_unigene34663 uagpf v2.0 150
AutoFact: putative translation factor [Arabidopsis thaliana] gb|AAF03443.1|AC010797_19 hypothetical protein [Arabidopsis thaliana] gb|AAL84979.1| At3g1920/F28J7.25 [Arabidopsis thaliana] gb|AAN28792.1| At3g1920/F28J7.25 [Arabidopsis thaliana] gb|AEE73735.1| putativ 2.0e-23
Blast2go: translation factor-like 7.12909e-34
unknown
uagpf_v2_unigene37589 uagpf v2.0 365
AutoFact: [H] COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase 0.0
Blast2go: riboflavin biosynthesis protein chloroplastic-like 0.0
Putative coding
uagpf_v2_unigene39661 uagpf v2.0 283
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Os06g0677300 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Internal
uagpf_v2_unigene40633 uagpf v2.0 406
AutoFact: GTP cyclohydrolase-2 [Arabidopsis thaliana] sp|P47924.2|RIBBA_ARATH RecName: Full=Riboflavin biosynthesis protein ribBA, chloroplastic; Includes: RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; Includes: RecName: Full=GTP 0.0
Blast2go: riboflavin biosynthesis protein chloroplastic-like 0.0
unknown
uagpf_v2_unigene41202 uagpf v2.0 390
AutoFact: RING/U-box domain-containing protein [Arabidopsis thaliana] ref|NP_851231.1| RING/U-box domain-containing protein [Arabidopsis thaliana] dbj|BAB08241.1| unnamed protein product [Arabidopsis thaliana] gb|AED97347.1| RING/U-box domain-containing protein [Ar 0.0
FL-Next: tr=Zinc finger (C3HC4 type RING finger) family protein; Musa acuminata (Banana) (Musa cavendishii). 0.0
Blast2go: zinc finger (c3hc4-type ring finger) 0.0
Internal
uagpf_v2_unigene42091 uagpf v2.0 283
AutoFact: Ischemia/reperfusion inducible protein n=3 Tax=Andropogoneae RepID=B6T950_MAIZE 0.0
FL-Next: tr=Protein SUA5, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ischemia reperfusion inducible protein 0.0
N-terminus
uagpf_v2_unigene51875 uagpf v2.0 280
AutoFact: 'GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase' n=3 Tax=Oryza sativa RepID=Q6L506_ORYSJ 2.0e-19
FL-Next: sp=Riboflavin biosynthesis protein ribBA, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: riboflavin biosynthesis protein chloroplastic-like 8.38708e-24
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain