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Assembly Name: uagpf v2.0

Name: G-patch domain

Term: IPR000467  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene15 uagpf v2.0 410
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
Blast2go: swap domain-containing protein 0.0
unknown
uagpf_v2_unigene1364 uagpf v2.0 578
AutoFact: D111/G-patch domain-containing protein [Arabidopsis thaliana] emb|CAB36744.1| hypothetical protein [Arabidopsis thaliana] emb|CAB79411.1| hypothetical protein [Arabidopsis thaliana] gb|ABI93912.1| At4g25020 [Arabidopsis thaliana] gb|AEE84992.1| D111/G-pat 1.0e-35
Blast2go: protein mos2-like 0.0
unknown
uagpf_v2_unigene1789 uagpf v2.0 432
AutoFact: D111/G-patch; Zinc finger, C2H2-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
N-terminus
uagpf_v2_unigene1802 uagpf v2.0 703
AutoFact: D111/G-patch; Zinc finger, C2H2-type n=1 Tax=Medicago truncatula RepID=Q2HRQ8_MEDTR 7.0e-32
Blast2go: d111 g-patch domain-containing protein 0.0
Coding
uagpf_v2_unigene2747 uagpf v2.0 468
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
uagpf_v2_unigene3231 uagpf v2.0 691
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
FL-Next: tr=D111/G-patch domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
Internal
uagpf_v2_unigene3775 uagpf v2.0 527
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: sp=Zinc finger CCCH domain-containing protein 18; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
C-terminus
uagpf_v2_unigene4076 uagpf v2.0 596
AutoFact: Pin2-interacting protein x1, putative n=1 Tax=Ricinus communis RepID=B9T7Y1_RICCO 0.0
FL-Next: tr=D111/G-patch domain-containing protein, putative, expressed; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: d111 g-patch domain-containing protein 0.0
N-terminus
uagpf_v2_unigene4450 uagpf v2.0 884
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene4567 uagpf v2.0 230
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
Internal
uagpf_v2_unigene5236 uagpf v2.0 830
AutoFact: Zinc finger CCCH domain-containing protein 18 n=4 Tax=Oryza sativa RepID=C3H18_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger ccch domain-containing protein 18-like 0.0
C-terminus
uagpf_v2_unigene5572 uagpf v2.0 876
AutoFact: DNA-damage-repair/toleration protein DRT111 [Arabidopsis thaliana] sp|P42698.2|DR111_ARATH RecName: Full=DNA-damage-repair/toleration protein DRT111, chloroplastic; Flags: Precursor gb|AAF19751.1|AC009917_10 Strong similarity to gi|1169200 DNA-Damage-Repa 0.0
FL-Next: sp=DNA-damage-repair/toleration protein DRT111, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-damage-repair toleration protein drt111 0.0
N-terminus
uagpf_v2_unigene5593 uagpf v2.0 563
AutoFact: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] ref|NP_001078041.1| GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] gb|AAD23716.1| hypothetic 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene5962 uagpf v2.0 398
AutoFact: Diphthamide biosynthesis protein 1 n=3 Tax=Arabidopsis RepID=Q9FIT5_ARATH 3.0e-30
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: at5g62030-like protein 2.98402e-36
Putative C-terminus
uagpf_v2_unigene6827 uagpf v2.0 575
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
Blast2go: swap domain-containing protein 0.0
unknown
uagpf_v2_unigene7481 uagpf v2.0 1034
AutoFact: Tuftelin interacting protein, putative n=1 Tax=Ricinus communis RepID=B9SDF9_RICCO 0.0
FL-Next: tr=Tuftelin interacting protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene9056 uagpf v2.0 370
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: sp=Dynamin-related protein 3A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
uagpf_v2_unigene9937 uagpf v2.0 277
AutoFact: NXRV123_F01_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV123_F01 5' similar to Arabidopsis thaliana sequence At2g15410 putative retroelement pol polyprotein see http://mips.gsf.de/proj/thal/db/index.html, mRNA sequence. 0.0
FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
Blast2go: uncharacterized protein loc100249206 9.7425e-24
Putative N-terminus
uagpf_v2_unigene11513 uagpf v2.0 804
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus
uagpf_v2_unigene13806 uagpf v2.0 698
AutoFact: Splicing factor 4-like protein [Arabidopsis thaliana] sp|Q94C11.1|SUGP1_ARATH RecName: Full=SURP and G-patch domain-containing protein 1-like protein; AltName: Full=Splicing factor 4-like protein; Short=SF4-like protein gb|AAK59860.1| AT3g52120/F4F15_230 0.0
FL-Next: sp=SURP and G-patch domain-containing protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: swap domain-containing protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain