Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene9563 uagpf v2.0 868
AutoFact: tetratricopeptide repeat-containing protein [Arabidopsis thaliana] gb|AEE27660.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tetratricopeptide repeat protein 4 homolog 0.0
C-terminus
uagpf_v2_unigene9582 uagpf v2.0 522
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Signal recognition particle subunit srp72, putative; Ricinus communis (Castor bean). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
N-terminus
uagpf_v2_unigene9594 uagpf v2.0 372
AutoFact: tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] dbj|BAB11651.1| unnamed protein product [Arabidopsis thaliana] gb|AAU05484.1| At5g65160 [Arabidopsis thaliana] gb|AAU95427.1| At5g65160 [Arabidopsis thaliana] gb|AED98010.1| tetratri 1.0e-26
FL-Next: sp=TPR repeat-containing thioredoxin TTL1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 1.02305e-40
Internal
uagpf_v2_unigene9640 uagpf v2.0 299
AutoFact: ABA Overly-Sensitive 5 protein [Arabidopsis thaliana] sp|Q9ZU27.1|PPR76_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g51965, mitochondrial; Flags: Precursor gb|AAD12672.1| Similar to gi|3004555 F19F24.14 salt inducible protein homolo 2.0e-22
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g51965, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 4.51372e-26
Internal
uagpf_v2_unigene9643 uagpf v2.0 511
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative N-terminus
uagpf_v2_unigene9694 uagpf v2.0 606
AutoFact: cell division cycle protein 27-B [Arabidopsis thaliana] sp|Q8LGU6.1|CD27B_ARATH RecName: Full=Cell division cycle protein 27 homolog B; Short=CDC27 homolog B; AltName: Full=Protein HOBBIT emb|CAD31951.1| HOBBIT protein [Arabidopsis thaliana] gb|AEC06953.1 0.0
FL-Next: sp=Cell division cycle protein 27 homolog B; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cell division cycle protein 27 homolog b-like 0.0
C-terminus
uagpf_v2_unigene9826 uagpf v2.0 811
AutoFact: DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] sp|Q9FNM7.2|RH26_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 26 gb|AED91329.1| DEAD-box ATP-dependent RNA helicase 26 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna helicase 0.0
Internal
uagpf_v2_unigene9866 uagpf v2.0 1327
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative Complete
uagpf_v2_unigene9893 uagpf v2.0 350
AutoFact: putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] dbj|BAD21878.1| putative O-linked N-acetyl glucosamine transferase [Oryza sativa Japonica Group] 9.00054e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene9985 uagpf v2.0 274
AutoFact: peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] gb|AAM13295.1| peptidylprolyl isomerase (cyclophilin)-like [Arabidopsis thaliana] 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase-like 2-like 0.0
Coding
uagpf_v2_unigene10023 uagpf v2.0 1667
AutoFact: NMDA receptor-regulated protein, putative n=1 Tax=Ricinus communis RepID=B9RUV2_RICCO 0.0
FL-Next: tr=NMDA receptor-regulated protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
uagpf_v2_unigene10048 uagpf v2.0 291
AutoFact: PPR-repeat protein-like [Oryza sativa Japonica Group] gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group] 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 4.2039e-45
Internal
uagpf_v2_unigene10089 uagpf v2.0 312
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650 gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 8.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.04309e-41
Internal
uagpf_v2_unigene10092 uagpf v2.0 679
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene10114 uagpf v2.0 371
AutoFact: Pentatricopeptide repeat protein 65 n=2 Tax=Funariaceae RepID=F5CAD8_FUNHY 7.00005e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene10170 uagpf v2.0 544
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPI6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene10184 uagpf v2.0 1196
AutoFact: Unassigned protein
FL-Next: tr=Calmodulin binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: tetratricopeptide repeat protein 7b-like 0.0
N-terminus
uagpf_v2_unigene10332 uagpf v2.0 297
AutoFact: iy83d12.g1 Cycas ovule - normalized (NYBG) Cycas rumphii cDNA 3', mRNA sequence. 6.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g23330-like 6.1958e-19
C-terminus
uagpf_v2_unigene10351 uagpf v2.0 557
AutoFact: putative receptor protein kinase [Arabidopsis thaliana] dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gb|AED97129.1| putative r 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
uagpf_v2_unigene10364 uagpf v2.0 897
AutoFact: Clathrin heavy chain, putative; 28833-19741 n=27 Tax=Magnoliophyta RepID=Q9SRM1_ARATH 0.0
FL-Next: tr=Clathrin heavy chain, putative; Ricinus communis (Castor bean). 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain