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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene8243 uagpf v2.0 547
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Internal
uagpf_v2_unigene8247 uagpf v2.0 1469
AutoFact: protein SUPPRESSOR OF GENE SILENCING 3 homolog [Zea mays] sp|A1Y2B7.1|SGS3_MAIZE RecName: Full=Protein SUPPRESSOR OF GENE SILENCING 3 homolog; AltName: Full=Protein LEAFBLADELESS 1; AltName: Full=ZmSGS3 gb|ABH10613.1| leafbladeless1 [Zea mays] gb|ACN33294 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Putative C-terminus
uagpf_v2_unigene8333 uagpf v2.0 292
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial editing factor 22 1.32941e-21
C-terminus
uagpf_v2_unigene8434 uagpf v2.0 402
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g22960, mitochondrial; Flags: Precursor gb|AEE30315.1| pentatricopeptide repeat-containing protein [Ara 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.77303e-40
Internal
uagpf_v2_unigene8474 uagpf v2.0 426
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SKJ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable serine threonine-protein kinase at4g35230-like 0.0
Internal
uagpf_v2_unigene8493 uagpf v2.0 1922
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os08g0108200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene8546 uagpf v2.0 882
AutoFact: APO protein 1 [Arabidopsis thaliana] gb|AEE34293.1| APO protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: apo protein 1 0.0
C-terminus
uagpf_v2_unigene8675 uagpf v2.0 452
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 8.77484e-16
C-terminus
uagpf_v2_unigene8778 uagpf v2.0 841
AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat protein 0.0
Internal
uagpf_v2_unigene8813 uagpf v2.0 695
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18390, mitochondrial; Flags: Precursor gb|AED92549.1| pentatricopeptide repeat-containing protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
N-terminus
uagpf_v2_unigene8865 uagpf v2.0 405
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_0.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SIH9_VITVI 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 3.75898e-38
Internal
uagpf_v2_unigene8920 uagpf v2.0 902
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene9066 uagpf v2.0 295
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 1.22973e-33
N-terminus
uagpf_v2_unigene9180 uagpf v2.0 2255
AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 70 kda peptidyl-prolyl isomerase 0.0
Complete
uagpf_v2_unigene9241 uagpf v2.0 688
AutoFact: Glycoside hydrolase family 17 protein n=2 Tax=Eumusa RepID=Q1EP15_MUSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light chain-like protein 0.0
Internal
uagpf_v2_unigene9265 uagpf v2.0 541
AutoFact: Kinesin light chain, putative n=1 Tax=Ricinus communis RepID=B9RB32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light 0.0
Internal
uagpf_v2_unigene9374 uagpf v2.0 1132
AutoFact: calmodulin-binding receptor-like cytoplasmic kinase 2 [Arabidopsis thaliana] sp|Q8VZJ9.1|Y4330_ARATH RecName: Full=Probable leucine-rich repeat receptor-like protein kinase At4g00330 gb|AAL36420.1| unknown protein [Arabidopsis thaliana] gb|AAM91688.1| unk 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like protein kinase at4g00330-like 0.0
C-terminus
uagpf_v2_unigene9385 uagpf v2.0 458
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g62470, mitochondrial; Flags: Precursor emb|CAB82961.1| putative protein [Arabidopsis thaliana] gb|AAQ6 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
N-terminus
uagpf_v2_unigene9401 uagpf v2.0 715
AutoFact: BTB domain containing protein 2.0e-05
FL-Next: sp=Ethylene-overproduction protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eto1-like protein 1-like 0.0
Internal
uagpf_v2_unigene9406 uagpf v2.0 343
AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 5.60519e-45
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain