Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene6412 uagpf v2.0 593
AutoFact: Chaperone binding protein, putative n=1 Tax=Ricinus communis RepID=B9RTA1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
C-terminus
uagpf_v2_unigene6507 uagpf v2.0 628
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 3.10277e-31
N-terminus
uagpf_v2_unigene6533 uagpf v2.0 649
AutoFact: FAP multi-domain protein 3.0e-09
Blast2go: uncharacterized protein loc100784254 1.70422e-38
unknown
uagpf_v2_unigene6649 uagpf v2.0 708
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
C-terminus
uagpf_v2_unigene6673 uagpf v2.0 465
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine-protein kinase ctr1-like 0.0
Internal
uagpf_v2_unigene6686 uagpf v2.0 653
AutoFact: Os10g0486900 protein n=1 Tax=Oryza sativa Japonica Group RepID=Q7XD86_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat protein 1-like 0.0
N-terminus
uagpf_v2_unigene7249 uagpf v2.0 1248
AutoFact: peptidylprolyl isomerase [Arabidopsis thaliana] dbj|BAB10690.1| peptidylprolyl isomerase [Arabidopsis thaliana] gb|AED95689.1| peptidylprolyl isomerase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidylprolyl isomerase 0.0
N-terminus
uagpf_v2_unigene7372 uagpf v2.0 483
AutoFact: SPINDLY n=1 Tax=Sinningia speciosa RepID=B5AY31_9LAMI 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene7446 uagpf v2.0 594
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
C-terminus
uagpf_v2_unigene7452 uagpf v2.0 610
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene7511 uagpf v2.0 817
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9SX16_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7562 uagpf v2.0 525
AutoFact: PHD domain containing protein 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 2.60232e-39
C-terminus
uagpf_v2_unigene7571 uagpf v2.0 644
AutoFact: Receptor-like kinase n=1 Tax=Marchantia polymorpha RepID=A7VM23_MARPO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7857 uagpf v2.0 640
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|ACL13985.1| At5g21990 [Arabidopsis thaliana] gb|AED92964.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 3.41082e-33
N-terminus
uagpf_v2_unigene7918 uagpf v2.0 445
AutoFact: Putative selenium-binding protein, related n=1 Tax=Solanum demissum RepID=Q6F2D0_SOLDE 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene7954 uagpf v2.0 577
AutoFact: XPA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9S614_RICCO 0.0
FL-Next: tr=XPA-binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: pre-mrna-splicing factor syf1-like 0.0
Internal
uagpf_v2_unigene8068 uagpf v2.0 430
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18390, mitochondrial; Flags: Precursor gb|AED92549.1| pentatricopeptide repeat-containing protein [Ara 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene8107 uagpf v2.0 374
AutoFact: BY-2 kinesin-like protein 10 [Nicotiana tabacum] 0.0
Blast2go: kinesin-like protein kif2a-like 0.0
Putative coding
uagpf_v2_unigene8116 uagpf v2.0 348
AutoFact: Tetratricopeptide-like helical n=1 Tax=Medicago truncatula RepID=Q1SN04_MEDTR 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.96182e-44
Internal
uagpf_v2_unigene8223 uagpf v2.0 267
AutoFact: cell cycle control crn (crooked neck) protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb01g012080; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: pre-mrna-splicing factor clf1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain