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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene3848 uagpf v2.0 646
AutoFact: peroxisomal targeting signal 1 receptor [Nicotiana tabacum] 0.0
FL-Next: sp=Peroxisome biogenesis protein 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: peroxisomal targeting signal 1 receptor 0.0
C-terminus
uagpf_v2_unigene3874 uagpf v2.0 652
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|ACL13985.1| At5g21990 [Arabidopsis thaliana] gb|AED92964.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4063 uagpf v2.0 1170
AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi 7.0e-32
FL-Next: sp=50S ribosomal protein L12, chloroplastic; Porphyra yezoensis. Plastid; Chloroplast. 0.0
Blast2go: 50s ribosomal protein l7 l12-like 1.4013e-45
Complete
uagpf_v2_unigene4158 uagpf v2.0 1671
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene4165 uagpf v2.0 612
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 10-like 0.0
C-terminus
uagpf_v2_unigene4209 uagpf v2.0 669
AutoFact: Clathrin heavy chain, putative; 28833-19741 n=27 Tax=Magnoliophyta RepID=Q9SRM1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
N-terminus
uagpf_v2_unigene4210 uagpf v2.0 1864
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
Putative Complete
uagpf_v2_unigene4229 uagpf v2.0 526
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAK91373.1| AT4g39470/F23K16_100 [Arabidopsis thaliana] gb|AAO42760.1| At4g39470/F23K16_100 [Arabidopsis thaliana] gb|AEE87076.1| tetratricopeptide repeat domain-containing prote 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
uagpf_v2_unigene4242 uagpf v2.0 457
AutoFact: peptidyl-prolyl isomerase [Arabidopsis thaliana] sp|Q9LDC0.1|FKB42_ARATH RecName: Full=42 kDa peptidyl-prolyl isomerase; AltName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Protein TWISTED DWARF 1; AltName: Full=Protein ULTRACUR 0.0
Blast2go: 42 kda peptidyl-prolyl isomerase 0.0
unknown
uagpf_v2_unigene4347 uagpf v2.0 1285
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene4411 uagpf v2.0 449
AutoFact: RecName: Full=Mitochondrial import receptor subunit TOM20; AltName: Full=Translocase of outer membrane 20 kDa subunit emb|CAA63223.1| TOM20 [Solanum tuberosum] 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import receptor subunit tom20 0.0
N-terminus
uagpf_v2_unigene4476 uagpf v2.0 642
AutoFact: [RTKL] COG0515 Serine/threonine protein kinase 3.0e-27
Blast2go: serine threonine-protein kinase ctr1-like 0.0
unknown
uagpf_v2_unigene4546 uagpf v2.0 566
AutoFact: Pectin lyase-like protein [Arabidopsis thaliana] gb|AAB71972.1| putative polygalacturonase [Arabidopsis thaliana] gb|AEE33700.1| Pectin lyase-like protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Polygalacturonase; Chamaecyparis obtusa (Hinoki false-cypress). 0.0
Blast2go: polygalacturonase at1g48100-like 0.0
Putative C-terminus
uagpf_v2_unigene4574 uagpf v2.0 335
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: like protein domain-containing protein 0.0
C-terminus
uagpf_v2_unigene4617 uagpf v2.0 531
AutoFact: Unassigned protein
Blast2go: uncharacterized protein loc100809777 3.36312e-44
unknown
uagpf_v2_unigene4720 uagpf v2.0 581
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
C-terminus
uagpf_v2_unigene4728 uagpf v2.0 868
AutoFact: BTB domain containing protein 2.0e-05
FL-Next: sp=ETO1-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eto1-like protein 1-like 0.0
C-terminus
uagpf_v2_unigene4820 uagpf v2.0 887
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
Complete
uagpf_v2_unigene4834 uagpf v2.0 694
AutoFact: DnaJ domain containing protein 9.0e-05
Blast2go: dnaj heat shock n-terminal domain-containing protein 0.0
Putative coding
uagpf_v2_unigene4855 uagpf v2.0 476
AutoFact: zinc finger (MYND type) family protein / F-box family protein [Arabidopsis thaliana] sp|Q9FYF9.1|FB76_ARATH RecName: Full=F-box protein At1g67340 gb|AAG00241.1|AC002130_6 F1N21.16 [Arabidopsis thaliana] gb|AAL14418.1| At1g67340/F1N21_16 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f-box protein at1g67340-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain