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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
uagpf_v2_unigene53994 uagpf v2.0 506
• AutoFact: Unassigned protein
• Blast2go: tpr domain protein 5.31497e-29
unknown
uagpf_v2_unigene54037 uagpf v2.0 178
• AutoFact: Alpha-soluble NSF attachment protein 2 n=4 Tax=Arabidopsis RepID=SNAA2_ARATH 0.0
• Blast2go: alpha-soluble nsf attachment protein 0.0
unknown
uagpf_v2_unigene54137 uagpf v2.0 260
• AutoFact: putative receptor protein kinase [Arabidopsis thaliana] dbj|BAB09644.1| protein kinase-like protein [Arabidopsis thaliana] gb|AAL91617.1| AT5g59010/k19m22_210 [Arabidopsis thaliana] gb|ABH04487.1| At5g59010 [Arabidopsis thaliana] gb|AED97129.1| putative r 0.0
• Blast2go: protein 0.0
unknown
uagpf_v2_unigene54168 uagpf v2.0 440
• AutoFact: mamallian P58IPK-like protein [Arabidopsis thaliana] emb|CAB86083.1| putative protein [Arabidopsis thaliana] dbj|BAB08376.1| tetratricopeptide repeat protein 2-like [Arabidopsis thaliana] gb|AAM62560.1| unknown [Arabidopsis thaliana] gb|AED90562.1| mamall 0.0
• Blast2go: dnaj homolog subfamily c member 3 homolog 0.0
unknown
uagpf_v2_unigene54196 uagpf v2.0 337
• AutoFact: Putative tetratricopeptide repeat protein n=1 Tax=Oryza sativa RepID=Q8W378_ORYSA 1.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tetratricopeptide repeat protein 1-like 1.48126e-35
C-terminus
uagpf_v2_unigene54216 uagpf v2.0 409
• AutoFact: Pentatricopeptide, putative n=1 Tax=Oryza sativa Japonica Group RepID=Q10K51_ORYSJ 2.0e-23
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 4.81098e-30
C-terminus
uagpf_v2_unigene54242 uagpf v2.0 553
• AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AED92812.1| tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tpr domain protein 0.0
C-terminus
uagpf_v2_unigene54250 uagpf v2.0 519
• AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
uagpf_v2_unigene54539 uagpf v2.0 371
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26782, mitochondrial; Flags: Precursor dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thal 3.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 4.23622e-14
C-terminus
uagpf_v2_unigene54547 uagpf v2.0 583
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758 gb|AEE86306.1| pentatricopeptide repeat-containing 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 8.19039e-12
C-terminus
uagpf_v2_unigene54567 uagpf v2.0 324
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus
uagpf_v2_unigene54628 uagpf v2.0 510
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 3.0e-29
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein 1.28581e-37
C-terminus
uagpf_v2_unigene54732 uagpf v2.0 403
• AutoFact: FAP multi-domain protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein loc100784254 1.70422e-38
Internal
uagpf_v2_unigene54761 uagpf v2.0 315
• AutoFact: [R] COG0790 FOG: TPR repeat, SEL1 subfamily 3.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
uagpf_v2_unigene54820 uagpf v2.0 469
• AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: regulatory particle triple-a 1a 0.0
C-terminus
uagpf_v2_unigene54838 uagpf v2.0 543
• AutoFact: Pentatricopeptide repeat protein 91 n=3 Tax=Funariaceae RepID=F5CAE1_FUNHY 3.0e-35
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene54844 uagpf v2.0 331
• AutoFact: Peptidyl-prolyl isomerase n=1 Tax=Zea mays RepID=B6TI78_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 70 kda peptidyl-prolyl isomerase 0.0
N-terminus
uagpf_v2_unigene54853 uagpf v2.0 438
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Picea abies RepID=B3U1V1_PICAB 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene54932 uagpf v2.0 374
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene55020 uagpf v2.0 311
• AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat protein 1.85392e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain