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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene46688 uagpf v2.0 546
AutoFact: pfam01535, PPR, PPR repeat 5.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.41774e-35
Internal
uagpf_v2_unigene46715 uagpf v2.0 247
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] dbj|BAB08428.1| unnamed protein product [Arabidopsis thaliana] gb|AAM62783.1| unknown [Arabidopsis thaliana] gb|AAM91551.1| putative protein [Arabidopsis thaliana] gb|ABO38758.1| At 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: binding protein 0.0
Internal
uagpf_v2_unigene46784 uagpf v2.0 360
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: kinesin light chain-like protein 1.69412e-29
C-terminus
uagpf_v2_unigene46933 uagpf v2.0 465
AutoFact: putative RNA methyltransferase [Arabidopsis thaliana] sp|Q9LXB4.1|Y5620_ARATH RecName: Full=Putative RNA methyltransferase At5g10620 emb|CAB89381.1| putative protein [Arabidopsis thaliana] gb|AED91572.1| putative RNA methyltransferase [Arabidopsis thalian 3.0e-13
Blast2go: rna methyltransferase at5g10620-like 1.1212e-21
unknown
uagpf_v2_unigene47017 uagpf v2.0 440
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQC9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene47157 uagpf v2.0 316
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 1.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 1.63952e-43
Internal
uagpf_v2_unigene47198 uagpf v2.0 408
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 2.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
uagpf_v2_unigene47219 uagpf v2.0 303
AutoFact: Receptor protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SKJ2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable serine threonine-protein kinase at4g35230-like 0.0
Internal
uagpf_v2_unigene47288 uagpf v2.0 380
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene47395 uagpf v2.0 162
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230 gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 5.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g74600-like protein 1.42357e-33
N-terminus
uagpf_v2_unigene47477 uagpf v2.0 391
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SKC9_RICCO 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene47598 uagpf v2.0 426
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 3.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
Internal
uagpf_v2_unigene47755 uagpf v2.0 304
AutoFact: FKBP12-rapamycin complex-associated protein [Arabidopsis thaliana] sp|Q9FR53.1|TOR_ARATH RecName: Full=Serine/threonine-protein kinase TOR; AltName: Full=Protein TARGET OF RAPAMYCIN; Short=AtTOR gb|AAG43423.1|AF178967_1 pTOR [Arabidopsis thaliana] gb|AEE3 0.0
Blast2go: serine threonine-protein kinase tor-like isoform 2 0.0
unknown
uagpf_v2_unigene47793 uagpf v2.0 275
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230 gb|AAC98044.1| unknown protein [Arabidopsis thaliana] gb|AAO64144.1| unknown protein [Arabidopsi 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.4013e-45
Internal
uagpf_v2_unigene47810 uagpf v2.0 314
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g64320, mitochondrial; Flags: Precursor dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana] 6.0e-12
Blast2go: pentatricopeptide repeat-containing protein mitochondrial-like 3.85785e-17
Putative coding
uagpf_v2_unigene47891 uagpf v2.0 182
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.87401e-19
Internal
uagpf_v2_unigene47947 uagpf v2.0 313
AutoFact: Fk506 binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQB6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl isomerase pasticcino1 0.0
Internal
uagpf_v2_unigene48042 uagpf v2.0 303
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RQJ8_RICCO 9.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 7.92765e-28
Internal
uagpf_v2_unigene48158 uagpf v2.0 326
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070 gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana] gb|AEC07259.1| pentatricopeptide repe 3.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g23330-like 1.67505e-17
C-terminus
uagpf_v2_unigene48303 uagpf v2.0 338
AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain