Sustainpine_db
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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene44826 uagpf v2.0 237
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 9.94922e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
uagpf_v2_unigene44827 uagpf v2.0 251
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
uagpf_v2_unigene44867 uagpf v2.0 290
AutoFact: Selenium-binding protein-like n=4 Tax=Oryza sativa RepID=Q69WY1_ORYSJ 2.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 5.18815e-33
Putative N-terminus
uagpf_v2_unigene44945 uagpf v2.0 234
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group] 3.0e-33
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.4013e-44
N-terminus
uagpf_v2_unigene45045 uagpf v2.0 469
AutoFact: WS0336.C21_F15 WS-SE-N-A-18 Picea glauca cDNA clone WS0336_F15 3, mRNA sequence. 0.0
FL-Next: tr=Reverse transcriptase; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: retrotransposon unclassified 0.0
Putative C-terminus
uagpf_v2_unigene45092 uagpf v2.0 232
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic- partial 1.30917e-25
Internal
uagpf_v2_unigene45109 uagpf v2.0 456
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At5g65820 dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana] gb|AED98111.1| pentatric 5.99994e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene45138 uagpf v2.0 411
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene45164 uagpf v2.0 231
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at4g33990-like 6.04252e-24
C-terminus
uagpf_v2_unigene45168 uagpf v2.0 228
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SNN7_RICCO 3.99931e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene45179 uagpf v2.0 260
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g22960, mitochondrial; Flags: Precursor gb|AEE30315.1| pentatricopeptide repeat-containing protein [Ara 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.29944e-34
Internal
uagpf_v2_unigene45245 uagpf v2.0 298
AutoFact: kinesin light chain-related protein [Arabidopsis thaliana] gb|AAU94395.1| At5g53080 [Arabidopsis thaliana] gb|AED96301.1| kinesin light chain-related protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene45324 uagpf v2.0 340
AutoFact: Pentatricopeptide repeat protein (Fragment) n=1 Tax=Cycas revoluta RepID=B3U1U9_CYCRE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat protein 0.0
C-terminus
uagpf_v2_unigene45488 uagpf v2.0 355
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g30700; AltName: Full=Protein DYW9 emb|CAB52443.1| putative protein [Arabidopsis thaliana] emb|CAB79788 1.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.0652e-15
C-terminus
uagpf_v2_unigene45490 uagpf v2.0 349
AutoFact: O-linked n-acetylglucosamine transferase, ogt, putative n=1 Tax=Ricinus communis RepID=B9RLG2_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tetratricopeptide repeat protein 7a-like 0.0
Internal
uagpf_v2_unigene45494 uagpf v2.0 250
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9S4A9_RICCO 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.96134e-23
Internal
uagpf_v2_unigene45582 uagpf v2.0 391
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TMK7_PHYPA 5.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 2.8026e-45
Internal
uagpf_v2_unigene45662 uagpf v2.0 256
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600 gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana] gb|AEC06244.1| pentatricopeptide repe 2.0e-19
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.98e-24
Internal
uagpf_v2_unigene45700 uagpf v2.0 337
AutoFact: pentatricopeptide (PPR) repeat-containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
uagpf_v2_unigene45777 uagpf v2.0 304
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E911.1|PP400_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27460 gb|AED93691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 4.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 3.38937e-33
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain