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Assembly Name: uagpf v2.0

Name: Tetratricopeptide-like helical

Term: IPR011990  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene13007 uagpf v2.0 720
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170 emb|CAB36791.1| putative protein [Arabidopsis thaliana] emb|CAB80034.1| putative protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
C-terminus
uagpf_v2_unigene13045 uagpf v2.0 1009
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: trafficking protein particle complex subunit 12-like 0.0
N-terminus
uagpf_v2_unigene13163 uagpf v2.0 378
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 3.46014e-32
C-terminus
uagpf_v2_unigene13197 uagpf v2.0 600
AutoFact: FERONIA receptor-like kinase [Cardamine flexuosa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: feronia receptor-like kinase 0.0
Internal
uagpf_v2_unigene13241 uagpf v2.0 358
AutoFact: Heat shock protein 70 (HSP70)-interacting protein, putative n=1 Tax=Ricinus communis RepID=B9RJ86_RICCO 0.0
Blast2go: tetratricopeptide repeat domain-containing protein 0.0
Putative coding
uagpf_v2_unigene13250 uagpf v2.0 904
AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-soluble nsf attachment protein 0.0
N-terminus
uagpf_v2_unigene13324 uagpf v2.0 389
AutoFact: zinc ion binding protein [Arabidopsis thaliana] gb|AAK95259.1|AF410273_1 AT3g54360/T12E18_50 [Arabidopsis thaliana] emb|CAB81801.1| RING finger-like protein [Arabidopsis thaliana] gb|AAM63273.1| RING finger-like protein [Arabidopsis thaliana] gb|AAN18187. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: binding protein 0.0
Internal
uagpf_v2_unigene13391 uagpf v2.0 700
AutoFact: E3 ubiquitin-protein ligase CHIP [Arabidopsis thaliana] sp|Q9SRS9.1|CHIP_ARATH RecName: Full=E3 ubiquitin-protein ligase CHIP; AltName: Full=Carboxyl terminus of HSC70-interacting protein; Short=AtCHIP; AltName: Full=Plant U-box protein 61; AltName: Full= 2.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase chip-like 2.7367e-15
C-terminus
uagpf_v2_unigene13452 uagpf v2.0 724
AutoFact: anaphase-promoting complex subunit 6 [Arabidopsis thaliana] sp|B3DNN5.1|CDC16_ARATH RecName: Full=Anaphase-promoting complex subunit 6; AltName: Full=Cell division cycle protein 16 homolog; Short=CDC16 homolog; AltName: Full=Cyclosome subunit 6; AltName: 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division 0.0
Internal
uagpf_v2_unigene13512 uagpf v2.0 352
AutoFact: Protein SUPPRESSOR OF GENE SILENCING 3 n=1 Tax=Solanum lycopersicum RepID=SGS3_SOLLC 0.0
Blast2go: protein suppressor of gene silencing 3-like 0.0
Coding
uagpf_v2_unigene13596 uagpf v2.0 447
AutoFact: FAP multi-domain protein 1.0e-07
Blast2go: protein 5.35504e-29
unknown
uagpf_v2_unigene13610 uagpf v2.0 987
AutoFact: Eukaryotic initiation factor iso4G n=1 Tax=Carica papaya RepID=E3V0I0_CARPA 0.0
FL-Next: sp=Eukaryotic initiation factor iso-4F subunit p82-34; Triticum aestivum (Wheat). 0.0
Blast2go: eukaryotic translation initiation factor 4 gamma 0.0
N-terminus
uagpf_v2_unigene13651 uagpf v2.0 470
AutoFact: PREDICTED: similar to binding n=1 Tax=Vitis vinifera RepID=UPI00019836A8 0.0
Blast2go: tetratricopeptide repeat-containing protein 0.0
unknown
uagpf_v2_unigene13669 uagpf v2.0 627
AutoFact: Endosomal P24A protein, putative n=1 Tax=Ricinus communis RepID=B9STR3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endosomal p24a protein 0.0
N-terminus
uagpf_v2_unigene13722 uagpf v2.0 582
AutoFact: Pentatricopeptide repeat protein 79 (Fragment) n=2 Tax=Funariaceae RepID=F5CAE5_FUNHY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g20230 0.0
Putative C-terminus
uagpf_v2_unigene13832 uagpf v2.0 395
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Internal
uagpf_v2_unigene13873 uagpf v2.0 431
AutoFact: Alpha-soluble NSF attachment protein n=2 Tax=Elaeis guineensis RepID=B3TM19_ELAGV 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-soluble nsf attachment protein 0.0
N-terminus
uagpf_v2_unigene14008 uagpf v2.0 675
AutoFact: 26S protease regulatory subunit 7 homolog A n=26 Tax=Embryophyta RepID=PRS7A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: regulatory particle triple-a 1a 0.0
C-terminus
uagpf_v2_unigene14188 uagpf v2.0 765
AutoFact: putative UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC [Arabidopsis thaliana] sp|Q9M8Y0.1|SEC_ARATH RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; AltName: Full=Protein SECRET AGENT gb|A 0.0
FL-Next: sp=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC; Arabidopsis thaliana (Mouse-ear cress). 0.0
C-terminus
uagpf_v2_unigene14192 uagpf v2.0 655
AutoFact: genomes uncoupled 1 protein [Arabidopsis thaliana] sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Flags: Precursor gb|AAD26479.1| unknown protein [Arabidopsis thaliana] gb|AEC08542.1| genomes un 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At2g31400, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain