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Assembly Name: uagpf v2.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene37219 uagpf v2.0 390
AutoFact: Histone-lysine N-methyltransferase n=3 Tax=Andropogoneae RepID=C5XT28_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain protein 0.0
Putative C-terminus
uagpf_v2_unigene37627 uagpf v2.0 507
AutoFact: pfam12998, ING, Inhibitor of growth proteins N-terminal histone-binding 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: phd finger protein 5.54409e-31
N-terminus
uagpf_v2_unigene37710 uagpf v2.0 496
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Sterol regulatory element-binding protein site 2 protease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene38170 uagpf v2.0 424
AutoFact: SET domain protein (Fragment) n=2 Tax=Populus trichocarpa RepID=B9IDM7_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: set domain protein 0.0
Internal
uagpf_v2_unigene38332 uagpf v2.0 311
AutoFact: DNA binding / nucleic acid binding / protein binding / zinc ion binding 3.0e-10
FL-Next: sp=Zinc finger CCCH domain-containing protein 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 5.76748e-16
Internal
uagpf_v2_unigene38428 uagpf v2.0 517
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: enhanced downy mildew 2 0.0
Putative Complete
uagpf_v2_unigene38449 uagpf v2.0 455
AutoFact: putative PHD zinc finger protein [Ipomoea trifida] dbj|BAF36299.1| hypothetical protein [Ipomoea trifida] 0.0
FL-Next: tr=PHD finger family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dna binding 0.0
Internal
uagpf_v2_unigene38531 uagpf v2.0 291
AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: ubiquitin-protein ligase ubr7 0.0
N-terminus
uagpf_v2_unigene39160 uagpf v2.0 299
AutoFact: protein chromatin remodeling 24 [Arabidopsis thaliana] gb|AAL58917.1|AF462829_1 AT5g63950/MBM17_5 [Arabidopsis thaliana] gb|AAM98274.1| At5g63950/MBM17_5 [Arabidopsis thaliana] gb|AED97819.1| protein chromatin remodeling 24 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: dna excision repair protein ercc-6-like 0.0
Internal
uagpf_v2_unigene39198 uagpf v2.0 284
AutoFact: putative origin recognition complex 1 [Oryza sativa Japonica Group] dbj|BAG95868.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEE65230.1| hypothetical protein OsJ_20389 [Oryza sativa Japonica Group] 0.0
Blast2go: origin recognition complex subunit 1-like 0.0
Putative coding
uagpf_v2_unigene39373 uagpf v2.0 440
AutoFact: pfam00628, PHD, PHD-finger 2.0e-06
FL-Next: sp=Histone acetyltransferase HAC4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: uncharacterized protein at4g10930-like 0.0
Internal
uagpf_v2_unigene39554 uagpf v2.0 325
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SNH5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
uagpf_v2_unigene39572 uagpf v2.0 375
AutoFact: DUF3594 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene39688 uagpf v2.0 373
AutoFact: ABC transporter D family member 2, chloroplastic n=2 Tax=Arabidopsis RepID=AB2D_ARATH 3.0e-22
FL-Next: sp=ABC transporter D family member 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter d family member 2 1.50853e-24
C-terminus
uagpf_v2_unigene39783 uagpf v2.0 422
AutoFact: DNMT1-RFD multi-domain protein 4.0e-18
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: enhanced downy mildew 2 0.0
Internal
uagpf_v2_unigene39786 uagpf v2.0 288
AutoFact: cohesin loading factor subunit SCC2 [Arabidopsis thaliana] gb|ABQ12620.1| sister chromatid cohesion 2 [Arabidopsis thaliana] gb|AED92174.1| cohesin loading factor subunit SCC2 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein Sb02g000990; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: cohesin loading factor subunit scc2 0.0
Internal
uagpf_v2_unigene40188 uagpf v2.0 471
AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: arid bright dna-binding domain-containing protein 0.0
Internal
uagpf_v2_unigene40386 uagpf v2.0 317
AutoFact: Histone-lysine N-methyltransferase ATXR6, putative n=1 Tax=Ricinus communis RepID=B9RU15_RICCO 7.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
uagpf_v2_unigene40492 uagpf v2.0 487
AutoFact: serine/threonine-protein kinase WNK1 [Arabidopsis thaliana] sp|Q9CAV6.1|WNK1_ARATH RecName: Full=Serine/threonine-protein kinase WNK1; Short=AtWNK1; AltName: Full=Protein kinase with no lysine 1 gb|AAG51416.1|AC009465_16 putative mitogen activated protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: with no lysine kinase 0.0
N-terminus
uagpf_v2_unigene41251 uagpf v2.0 454
AutoFact: Trithorax, putative n=1 Tax=Ricinus communis RepID=B9RII0_RICCO 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain