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Assembly Name: uagpf v2.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene26645 uagpf v2.0 422
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCL9_RICCO 1.0e-18
Blast2go: acyl- n-acyltransferase with ring fyve phd-type zinc finger domain-containing protein 2.17577e-19
Putative coding
uagpf_v2_unigene26660 uagpf v2.0 527
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
uagpf_v2_unigene26669 uagpf v2.0 715
AutoFact: Set domain protein, putative n=1 Tax=Ricinus communis RepID=B9SQW4_RICCO 0.0
Blast2go: histone-lysine n-methyltransferase ashr3 0.0
unknown
uagpf_v2_unigene26768 uagpf v2.0 266
AutoFact: putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methylt 0.0
Blast2go: methyltransferase pmt20 0.0
Putative coding
uagpf_v2_unigene26931 uagpf v2.0 353
AutoFact: putative U1 snRNP 70K protein [Trifolium pratense] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 70 kda-like 0.0
N-terminus
uagpf_v2_unigene27173 uagpf v2.0 170
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVN5_RICCO 0.0
Blast2go: protein binding 0.0
unknown
uagpf_v2_unigene27565 uagpf v2.0 544
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SDZ8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene27938 uagpf v2.0 538
AutoFact: serine/threonine-protein kinase WNK1 [Arabidopsis thaliana] sp|Q9CAV6.1|WNK1_ARATH RecName: Full=Serine/threonine-protein kinase WNK1; Short=AtWNK1; AltName: Full=Protein kinase with no lysine 1 gb|AAG51416.1|AC009465_16 putative mitogen activated protein 0.0
Blast2go: with no lysine kinase 0.0
Putative coding
uagpf_v2_unigene28241 uagpf v2.0 378
AutoFact: Chromatin remodeling complex subunit n=1 Tax=Populus trichocarpa RepID=B9HEW0_POPTR 0.0
Blast2go: chromatin remodeling complex subunit 0.0
unknown
uagpf_v2_unigene28391 uagpf v2.0 474
AutoFact: putative methyltransferase PMT11 [Arabidopsis thaliana] sp|O22285.1|PMTB_ARATH RecName: Full=Probable methyltransferase PMT11 gb|AAB87124.1| expressed protein [Arabidopsis thaliana] gb|AAK96646.1| At2g39750/T5I7.5 [Arabidopsis thaliana] gb|AAM70566.1| At2 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable methyltransferase pmt11-like 0.0
Internal
uagpf_v2_unigene28565 uagpf v2.0 493
AutoFact: origin of replication complex 1B [Arabidopsis thaliana] emb|CAB53755.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAB78305.1| origin recognition complex subunit 1-like protein [Arabidopsis thaliana] emb|CAD20132.1| origi 0.0
FL-Next: tr=Origin recognition complex subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: origin recognition complex subunit 1-like 0.0
Internal
uagpf_v2_unigene29062 uagpf v2.0 285
AutoFact: DUF1423 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potyvirus vpg interacting protein 0.0
Internal
uagpf_v2_unigene29652 uagpf v2.0 254
AutoFact: histone-lysine N-methyltransferase ATX5 [Arabidopsis thaliana] sp|Q8GZ42.1|ATX5_ARATH RecName: Full=Histone-lysine N-methyltransferase ATX5; AltName: Full=Protein SET DOMAIN GROUP 29; AltName: Full=Trithorax-homolog protein 5; Short=TRX-homolog protein 5 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase atx4-like 0.0
C-terminus
uagpf_v2_unigene29792 uagpf v2.0 387
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: atp binding 1.58881e-25
Putative C-terminus
uagpf_v2_unigene29802 uagpf v2.0 416
AutoFact: DUF1423 multi-domain protein 0.0
Blast2go: potyvirus vpg interacting protein 0.0
Putative coding
uagpf_v2_unigene29828 uagpf v2.0 465
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SCL9_RICCO 1.0e-18
Blast2go: acyl- n-acyltransferase with ring fyve phd-type zinc finger domain-containing protein 2.17577e-19
unknown
uagpf_v2_unigene29936 uagpf v2.0 415
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
Complete
uagpf_v2_unigene29975 uagpf v2.0 414
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TSM0_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ebs-bah-phd domain-containing protein 0.0
N-terminus
uagpf_v2_unigene30022 uagpf v2.0 399
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
C-terminus
uagpf_v2_unigene30061 uagpf v2.0 391
AutoFact: SET domain protein n=1 Tax=Populus trichocarpa RepID=B9N8L1_POPTR 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ASHH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase ashh3-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain