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Assembly Name: uagpf v2.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene11648 uagpf v2.0 601
AutoFact: PHD domain containing protein 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
N-terminus
uagpf_v2_unigene11737 uagpf v2.0 464
AutoFact: DUF248 domain containing protein 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
uagpf_v2_unigene12051 uagpf v2.0 974
AutoFact: Zinc finger, FYVE/PHD-type [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd finger protein 0.0
C-terminus
uagpf_v2_unigene12654 uagpf v2.0 470
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: sp=Probable methyltransferase PMT25; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene13246 uagpf v2.0 1192
AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt3 0.0
C-terminus
uagpf_v2_unigene13272 uagpf v2.0 580
AutoFact: BAH-PHD domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TRM7_PHYPA 0.0
Blast2go: early bolting in short days 0.0
unknown
uagpf_v2_unigene13394 uagpf v2.0 1027
AutoFact: putative methyltransferase PMT3 [Arabidopsis thaliana] ref|NP_001031639.1| putative methyltransferase PMT3 [Arabidopsis thaliana] sp|Q93YV7.1|PMT3_ARATH RecName: Full=Probable methyltransferase PMT3 gb|AAL24095.1| putative ankyrin protein [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt3 0.0
Internal
uagpf_v2_unigene13443 uagpf v2.0 696
AutoFact: SNF2 and helicase domain-containing protein [Arabidopsis thaliana] gb|AAC97224.1| putative helicase [Arabidopsis thaliana] gb|AAL24339.1| SNF2/RAD54 family (ETL1 subfamily) protein [Arabidopsis thaliana] gb|AAO00936.1| SNF2/RAD54 family (ETL1 subfamily) p 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: snf2 family dna-dependent atpase 0.0
Complete
uagpf_v2_unigene13478 uagpf v2.0 568
AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: ubiquitin-protein ligase ubr7 0.0
Putative N-terminus
uagpf_v2_unigene13784 uagpf v2.0 586
AutoFact: fimbrin-like protein 2 [Arabidopsis thaliana] sp|Q9FKI0.1|FIMB2_ARATH RecName: Full=Fimbrin-like protein 2 dbj|BAB09267.1| fimbrin [Arabidopsis thaliana] gb|AAK76454.1| putative fimbrin protein [Arabidopsis thaliana] gb|AAN13139.1| putative fimbrin protei 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fimbrin-like protein 2-like 0.0
C-terminus
uagpf_v2_unigene13810 uagpf v2.0 915
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
uagpf_v2_unigene14335 uagpf v2.0 1525
AutoFact: protein alfin-like 3 [Arabidopsis thaliana] emb|CAB87196.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAL32929.1| nucleic acid binding protein-like [Arabidopsis thaliana] gb|AAM47893.1| nucleic acid binding protein-like [Arabidopsis thal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete
uagpf_v2_unigene14731 uagpf v2.0 654
AutoFact: histone-lysine N-methyltransferase ATXR6 [Arabidopsis thaliana] sp|Q9FNE9.1|ATXR6_ARATH RecName: Full=Histone-lysine N-methyltransferase ATXR6; AltName: Full=Protein SET DOMAIN GROUP 34; AltName: Full=Trithorax-related protein 6; Short=TRX-related protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
N-terminus
uagpf_v2_unigene15705 uagpf v2.0 450
AutoFact: PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] dbj|BAD95354.1| receptor like protein [Arabidopsis thaliana] gb|AEE84563.1| PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative early bolting in short days; Picea wilsonii. 0.0
Blast2go: bah-phd domain-containing protein 0.0
N-terminus
uagpf_v2_unigene15955 uagpf v2.0 811
AutoFact: Phd/F-box containing protein n=1 Tax=Cucumis melo subsp. melo RepID=E5GBF1_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phd f-box containing 0.0
C-terminus
uagpf_v2_unigene16028 uagpf v2.0 770
AutoFact: putative methyltransferase PMT21 [Arabidopsis thaliana] ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyltransferase pmt20 0.0
Internal
uagpf_v2_unigene16658 uagpf v2.0 913
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RYZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
N-terminus
uagpf_v2_unigene16867 uagpf v2.0 814
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRE2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 0.0
C-terminus
uagpf_v2_unigene17434 uagpf v2.0 619
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
C-terminus
uagpf_v2_unigene17466 uagpf v2.0 1564
AutoFact: PHD finger/nucleic acid binding protein [Olimarabidopsis pumila] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna binding 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain