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Assembly Name: uagpf v2.0

Name: Zinc finger, PHD-type

Term: IPR001965  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene41507 uagpf v2.0 342
AutoFact: DNA helicase INO80 complex-like 1 [Arabidopsis thaliana] sp|Q8RXS6.2|INO80_ARATH RecName: Full=DNA helicase INO80; Short=AtINO80; AltName: Full=Putative DNA helicase INO80 complex homolog 1 gb|AEE79637.1| DNA helicase INO80 complex-like 1 [Arabidopsis tha 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna helicase ino80 complex-like 1 0.0
Internal
uagpf_v2_unigene41596 uagpf v2.0 272
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear protein x1 0.0
Putative N-terminus
uagpf_v2_unigene42305 uagpf v2.0 284
AutoFact: DUF1423 domain containing protein 2.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: potyviral vpg interacting protein 1 3.83236e-34
Internal
uagpf_v2_unigene42346 uagpf v2.0 326
AutoFact: YDG_SRA multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger 0.0
Internal
uagpf_v2_unigene42399 uagpf v2.0 319
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9S456_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ankyrin-like protein 0.0
Internal
uagpf_v2_unigene42487 uagpf v2.0 364
AutoFact: DC1 domain-containing protein [Arabidopsis thaliana] gb|AEE30051.1| DC1 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Protein binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: dc1 domain-containing protein 0.0
Putative C-terminus
uagpf_v2_unigene42735 uagpf v2.0 254
AutoFact: F8M12.8 protein n=1 Tax=Arabidopsis thaliana RepID=O81621_ARATH 1.0e-11
FL-Next: tr=F8M12.8 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phd finger family protein 4.17811e-15
N-terminus
uagpf_v2_unigene43106 uagpf v2.0 412
AutoFact: PHD-finger, putative [Oryza sativa Japonica Group] gb|ABA92921.1| PHD-finger family protein, expressed [Oryza sativa Japonica Group] 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 4.93454e-24
Internal
uagpf_v2_unigene43390 uagpf v2.0 265
AutoFact: putative helicase [Arabidopsis thaliana] 0.0
FL-Next: sp=DNA helicase INO80; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase ino80-like 0.0
Internal
uagpf_v2_unigene43436 uagpf v2.0 243
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
Blast2go: nuclear protein x1 0.0
Putative coding
uagpf_v2_unigene43559 uagpf v2.0 348
AutoFact: RING/FYVE/PHD zinc finger protein [Arabidopsis thaliana] gb|AAF31272.1|AC006424_1 Location of EST 206I21T7, gb|N37185 [Arabidopsis thaliana] gb|AEE31531.1| RING/FYVE/PHD zinc finger protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: ring fyve phd zinc finger protein 0.0
Internal
uagpf_v2_unigene44261 uagpf v2.0 354
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVP2_RICCO 3.0e-22
Blast2go: protein 1.15589e-29
Coding
uagpf_v2_unigene44315 uagpf v2.0 329
AutoFact: DNA helicase hus2, putative n=1 Tax=Ricinus communis RepID=B9RFH2_RICCO 0.0
FL-Next: sp=ATP-dependent DNA helicase Q-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 0.0
Internal
uagpf_v2_unigene44935 uagpf v2.0 222
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: histone-lysine n-methyltransferase 0.0
Internal
uagpf_v2_unigene45387 uagpf v2.0 252
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RY52_RICCO 0.0
Blast2go: dna binding 0.0
Putative coding
uagpf_v2_unigene45474 uagpf v2.0 295
AutoFact: PHD finger protein-like [Oryza sativa Japonica Group] 0.0
Blast2go: phd finger-containing protein 0.0
unknown
uagpf_v2_unigene45493 uagpf v2.0 362
AutoFact: Unassigned protein
FL-Next: sp=Uncharacterized protein At4g10930; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
uagpf_v2_unigene45584 uagpf v2.0 294
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RFB9_RICCO 2.0e-25
Blast2go: ring u-box domain-containing protein 8.79016e-28
Coding
uagpf_v2_unigene45606 uagpf v2.0 229
AutoFact: Chromo domain protein, putative n=1 Tax=Ricinus communis RepID=B9RDU3_RICCO 0.0
Blast2go: atp-dependent helicase brm-like 0.0
Coding
uagpf_v2_unigene45657 uagpf v2.0 264
AutoFact: Pathogenesis-related homeodomain protein [Arabidopsis thaliana] sp|P48785.1|PRH_ARATH RecName: Full=Pathogenesis-related homeodomain protein; Short=PRHA gb|AAA32843.1| homeodomain protein [Arabidopsis thaliana] gb|AAC49836.1| PRHA [Arabidopsis thaliana] e 3.0e-30
FL-Next: sp=Pathogenesis-related homeodomain protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: pathogenesis-related homeodomain protein 1.6812e-39
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain