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Assembly Name: uagpf v2.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene186 uagpf v2.0 235
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] 3.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 7.22131e-26
C-terminus
uagpf_v2_unigene1347 uagpf v2.0 1057
AutoFact: BcpLH protein [Brassica rapa subsp. pekinensis] gb|AAT77418.1| dsRNA-binding protein LH-c [Brassica napus] 9.0e-13
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 0.0
N-terminus
uagpf_v2_unigene1463 uagpf v2.0 396
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RH31_RICCO 9.99995e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna-binding protein 2-like 0.0
C-terminus
uagpf_v2_unigene1554 uagpf v2.0 960
AutoFact: Double-stranded RNA binding protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T6H7_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: double-stranded rna binding protein 0.0
N-terminus
uagpf_v2_unigene1822 uagpf v2.0 346
AutoFact: Beta-D-glucosidase n=1 Tax=Gossypium hirsutum RepID=Q7XAS3_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydrolyzing o-glycosyl 0.0
Internal
uagpf_v2_unigene2040 uagpf v2.0 727
AutoFact: regulatory associated protein of mTOR [Arabidopsis thaliana] sp|Q93YQ1.1|RTOR1_ARATH RecName: Full=Regulatory-associated protein of TOR 1; AltName: Full=Protein RAPTOR 1; AltName: Full=Protein RAPTOR 1B; Short=AtRaptor1b gb|AAL24320.1| Unknown protein [Ar 0.0
FL-Next: sp=Regulatory-associated protein of TOR 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: regulatory-associated protein of tor 1-like 0.0
C-terminus
uagpf_v2_unigene2368 uagpf v2.0 780
AutoFact: Double-stranded RNA binding protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TW99_PHYPA 1.0e-24
Blast2go: dsrna-binding protein 4.67357e-29
unknown
uagpf_v2_unigene2608 uagpf v2.0 412
AutoFact: BcpLH protein [Brassica rapa subsp. pekinensis] gb|AAT77418.1| dsRNA-binding protein LH-c [Brassica napus] 9.0e-13
Blast2go: dsrna-binding protein 0.0
unknown
uagpf_v2_unigene2733 uagpf v2.0 662
AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
C-terminus
uagpf_v2_unigene2751 uagpf v2.0 532
AutoFact: F13O11.18 protein n=1 Tax=Arabidopsis thaliana RepID=Q9XIQ8_ARATH 5.0e-30
FL-Next: tr=F13O11.18 protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ribosomal protein s5 family protein 1.73264e-34
Internal
uagpf_v2_unigene2925 uagpf v2.0 1154
AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein s5 family protein 0.0
C-terminus
uagpf_v2_unigene5910 uagpf v2.0 571
AutoFact: 30S ribosomal protein S5, putative n=1 Tax=Ricinus communis RepID=B9RBC3_RICCO 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein s5 0.0
N-terminus
uagpf_v2_unigene8581 uagpf v2.0 315
AutoFact: Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease III, bacterial [Medicago truncatula] 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer homolog 1-like 0.0
Internal
uagpf_v2_unigene8859 uagpf v2.0 362
AutoFact: Dicer-like 4 n=1 Tax=Physcomitrella patens RepID=B3SRQ1_9BRYO 6.0e-12
FL-Next: sp=Dicer-like protein 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dsrna-specific nuclease dicer and related ribonuclease 6.85019e-14
Internal
uagpf_v2_unigene8922 uagpf v2.0 263
AutoFact: ATP-dependent RNA helicase, putative n=1 Tax=Ricinus communis RepID=B9RL32_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp-dependent rna 0.0
Internal
uagpf_v2_unigene9351 uagpf v2.0 445
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Internal
uagpf_v2_unigene9944 uagpf v2.0 578
AutoFact: Putative helicase n=1 Tax=Oryza sativa RepID=Q8W302_ORYSA 7.0e-17
Blast2go: probable atp-dependent rna helicase dhx36-like 1.73412e-18
Putative coding
uagpf_v2_unigene10422 uagpf v2.0 846
AutoFact: Double-stranded RNA-binding protein 6 n=1 Tax=Oryza sativa Japonica Group RepID=DRB6_ORYSJ 5.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 0.0
C-terminus
uagpf_v2_unigene10517 uagpf v2.0 461
AutoFact: dsRNA-binding protein [Brassica oleracea var. gongylodes] emb|CAD59428.1| dsRNA-binding protein [Brassica oleracea var. gemmifera] 7.00649e-44
Blast2go: dsrna-binding protein 0.0
Putative coding
uagpf_v2_unigene11102 uagpf v2.0 660
AutoFact: Exo-beta-glucanase n=1 Tax=Lilium longiflorum RepID=Q6UY81_LILLO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain