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Assembly Name: uagpf v2.0

Name: Double-stranded RNA-binding-like

Term: IPR014720  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
uagpf_v2_unigene47737 uagpf v2.0 376
AutoFact: Double-stranded RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZ63_RICCO 0.0
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Internal
uagpf_v2_unigene47989 uagpf v2.0 307
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
uagpf_v2_unigene49049 uagpf v2.0 274
AutoFact: DEA(D/H)-box RNA helicase family protein n=5 Tax=Arabidopsis RepID=F4IM84_ARATH 0.0
FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable atp-dependent rna helicase dhx36-like 0.0
Internal
uagpf_v2_unigene49359 uagpf v2.0 349
AutoFact: Unassigned protein
FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Internal
uagpf_v2_unigene49762 uagpf v2.0 548
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
uagpf_v2_unigene51477 uagpf v2.0 328
AutoFact: dsrm domain containing protein 7.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 2.60526e-09
N-terminus
uagpf_v2_unigene53175 uagpf v2.0 470
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
Blast2go: protein 0.0
unknown
uagpf_v2_unigene54104 uagpf v2.0 287
AutoFact: double-stranded RNA-binding (DsRBD) domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dsrna-binding protein 3 0.0
Internal
uagpf_v2_unigene54214 uagpf v2.0 543
AutoFact: Beta-D-glucan exohydrolase, isoenzyme ExoII n=3 Tax=Triticeae RepID=Q42835_HORVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase family 3 n terminal domain containing expressed 0.0
C-terminus
uagpf_v2_unigene55073 uagpf v2.0 301
AutoFact: Beta-D-glucan exohydrolase n=1 Tax=Nicotiana tabacum RepID=O82151_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
C-terminus
uagpf_v2_unigene55109 uagpf v2.0 330
AutoFact: Glycosyl hydrolase-like protein (Fragment) n=6 Tax=Picea sitchensis RepID=E0Z5X8_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycosyl hydrolase-like protein 0.0
Internal
uagpf_v2_unigene55257 uagpf v2.0 304
AutoFact: Beta-D-glucosidase n=1 Tax=Gossypium hirsutum RepID=Q7XAS3_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydrolyzing o-glycosyl 0.0
Internal
uagpf_v2_unigene55268 uagpf v2.0 289
AutoFact: Beta-D-glucan exohydrolase n=1 Tax=Nicotiana tabacum RepID=O82151_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
Putative C-terminus
uagpf_v2_unigene55328 uagpf v2.0 335
AutoFact: Beta-D-glucosidase n=1 Tax=Gossypium hirsutum RepID=Q7XAS3_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydrolyzing o-glycosyl 0.0
Internal
uagpf_v2_unigene55391 uagpf v2.0 263
AutoFact: Beta-D-glucosidase n=1 Tax=Gossypium hirsutum RepID=Q7XAS3_GOSHI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hydrolyzing o-glycosyl 0.0
N-terminus
uagpf_v2_unigene55398 uagpf v2.0 449
AutoFact: Hydrolase, hydrolyzing O-glycosyl compounds, putative n=1 Tax=Ricinus communis RepID=B9SD66_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lysosomal beta glucosidase-like 0.0
Internal
uagpf_v2_unigene55459 uagpf v2.0 532
AutoFact: 40S ribosomal protein S2, putative n=2 Tax=Ricinus communis RepID=B9RIB2_RICCO 0.0
Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain